RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 NOX5Q96PH1 765 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 DEPDC7Q96QD5 511 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 C2orf49Q9BVC5 232 aaPredicted RBP24.82■■□□□ 1.56
FOXA1-204ENST00000554607 UCKL1Q9NWZ5 548 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 NEMP2A6NFY4 417 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 PPP1R3GB7ZBB8 358 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 KPNA3O00505 521 aaPredicted RBP24.81■■□□□ 1.56
FOXA1-204ENST00000554607 FFAR2O15552 330 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 PRNPP04156 253 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 SRCP12931 536 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 PRLRP16471 622 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 DUSP3P51452 185 aaPredicted RBP24.81■■□□□ 1.56
FOXA1-204ENST00000554607 PCBP4P57723 403 aaKnown RBP24.81■■□□□ 1.56
FOXA1-204ENST00000554607 NME3Q13232 169 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 ZNF284Q2VY69 593 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 BROXQ5VW32 411 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 CDCP2Q5VXM1 449 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 C11orf57Q6ZUT1 292 aaPredicted RBP24.81■■□□□ 1.56
FOXA1-204ENST00000554607 DCP2Q8IU60 420 aaKnown RBP24.81■■□□□ 1.56
FOXA1-204ENST00000554607 KLK6Q92876 244 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 CPXM1Q96SM3 734 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 MYOCQ99972 504 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 CALN1Q9BXU9 219 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 USP29Q9HBJ7 922 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 ACP6Q9NPH0 428 aa24.81■■□□□ 1.56
FOXA1-204ENST00000554607 SETXQ7Z333 2677 aaKnown RBP24.8■■□□□ 1.56
FOXA1-204ENST00000554607 OPA1O60313 960 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 PAGE1O75459 146 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 PIAS2O75928 621 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 GP1BAP07359 652 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 CTSLP07711 333 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 USP8P40818 1118 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 IRAK1P51617 712 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 UCNP55089 124 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 TMC6Q7Z403 805 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 ZNF843Q8N446 348 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 WDTC1Q8N5D0 677 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 OR2A12Q8NGT7 310 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 DUSP23Q9BVJ7 150 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 SIK2Q9H0K1 926 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 NLGN3Q9NZ94 848 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 CTNND2Q9UQB3 1225 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 PCDHB1Q9Y5F3 818 aa24.8■■□□□ 1.56
FOXA1-204ENST00000554607 FLNBO75369 2602 aaKnown RBP24.79■■□□□ 1.56
FOXA1-204ENST00000554607 GRAP2O75791 330 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 PCDH8O95206 1070 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 FGFR1OPO95684 399 aaKnown RBP24.79■■□□□ 1.56
FOXA1-204ENST00000554607 MT-CO1P00395 513 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 RHOCP08134 193 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 NOS2P35228 1153 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 CLCN6P51797 869 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 OR6B2Q6IFH4 312 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 ERN2Q76MJ5 926 aaKnown RBP24.79■■□□□ 1.56
FOXA1-204ENST00000554607 C14orf80Q86SX3 495 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 OR13H1Q8NG92 308 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 ARRDC3Q96B67 414 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 SRRTQ9BXP5 876 aaKnown RBP24.79■■□□□ 1.56
FOXA1-204ENST00000554607 HDAC8Q9BY41 377 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 ABCG4Q9H172 646 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 RRN3Q9NYV6 651 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 PCDHGC3Q9UN70 934 aa24.79■■□□□ 1.56
FOXA1-204ENST00000554607 M0QYT0 321 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 ERVH48-1M5A8F1 160 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 DXOO77932 396 aaKnown RBP24.78■■□□□ 1.56
FOXA1-204ENST00000554607 CFHR1Q03591 330 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 SMYD5Q6GMV2 418 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 FAM183BPQ6ZVS7 135 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 ABI3BPQ7Z7G0 1075 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 SETD3Q86TU7 594 aaPredicted RBP24.78■■□□□ 1.56
FOXA1-204ENST00000554607 FAM181AQ8N9Y4 354 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 PPP1R16AQ96I34 528 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 APOLD1Q96LR9 279 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 PSMB7Q99436 277 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 FZD3Q9NPG1 666 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 VPS51Q9UID3 782 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 HS3ST3A1Q9Y663 406 aa24.78■■□□□ 1.56
FOXA1-204ENST00000554607 SCAMP1O15126 338 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 DAB1O75553 588 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 GIMD1P0DJR0 217 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 PLA2G2AP14555 144 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 GGCXP38435 758 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 RECQLP46063 649 aaPredicted RBP24.77■■□□□ 1.56
FOXA1-204ENST00000554607 LSSP48449 732 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 STX17P56962 302 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 TMPRSS3P57727 454 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 ERVPABLB-1P60509 514 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 HNRNPKP61978 463 aaKnown RBP eCLIP24.77■■□□□ 1.56
FOXA1-204ENST00000554607 GABREP78334 506 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 SLC6A3Q01959 620 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 PAK1Q13153 545 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 ARHGAP44Q17R89 818 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 BRMS1LQ5PSV4 323 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 TRIM65Q6PJ69 517 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 OLFML1Q6UWY5 402 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 WBP1Q96G27 269 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 HIC2Q96JB3 615 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 WDCPQ9H6R7 721 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 TMEM51Q9NW97 253 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 IL36AQ9UHA7 158 aa24.77■■□□□ 1.56
FOXA1-204ENST00000554607 TDRD6O60522 2096 aaKnown RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms