RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 MIS18BP1Q6P0N0 1132 aa5.56□□□□□ -1.52
CHD8-207ENST00000554384 GJB7Q6PEY0 223 aa5.56□□□□□ -1.52
CHD8-207ENST00000554384 WIPF2Q8TF74 440 aaPredicted RBP5.56□□□□□ -1.52
CHD8-207ENST00000554384 RAB40AQ8WXH6 277 aa5.56□□□□□ -1.52
CHD8-207ENST00000554384 RFFLQ8WZ73 363 aa5.56□□□□□ -1.52
CHD8-207ENST00000554384 HDAC2Q92769 488 aaKnown RBP5.56□□□□□ -1.52
CHD8-207ENST00000554384 PIMREGQ9BSJ6 248 aa5.56□□□□□ -1.52
CHD8-207ENST00000554384 HEMGNQ9BXL5 484 aa5.56□□□□□ -1.52
CHD8-207ENST00000554384 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.56□□□□□ -1.52
CHD8-207ENST00000554384 UNC45AQ9H3U1 944 aa5.56□□□□□ -1.52
CHD8-207ENST00000554384 ZHX3Q9H4I2 956 aa5.56□□□□□ -1.52
CHD8-207ENST00000554384 MAP3K20Q9NYL2 800 aaKnown RBP5.56□□□□□ -1.52
CHD8-207ENST00000554384 ICKQ9UPZ9 632 aa5.56□□□□□ -1.52
CHD8-207ENST00000554384 TDRD9Q8NDG6 1382 aaKnown RBP5.55□□□□□ -1.52
CHD8-207ENST00000554384 SMIM35A0A1B0GVV1 85 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 CEP104O60308 925 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 CCNT1O60563 726 aaKnown RBP5.55□□□□□ -1.52
CHD8-207ENST00000554384 CAPN3P20807 821 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 RGS2P41220 211 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 CPA2P48052 419 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 SUPT20HL1Q3ZLR7 823 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 MEX3CQ5U5Q3 659 aaKnown RBP5.55□□□□□ -1.52
CHD8-207ENST00000554384 FAM171A1Q5VUB5 890 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 HAUS3Q68CZ6 603 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 MOB3CQ70IA8 216 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 TRIM74Q86UV6 250 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 TRIM73Q86UV7 250 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 CCDC25Q86WR0 208 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 CNTROBQ8N137 903 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 FAM47BQ8NA70 645 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.55□□□□□ -1.52
CHD8-207ENST00000554384 KIF1BPQ96EK5 621 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 ERVK-5Q9HDB9 667 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 PEMTQ9UBM1 199 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 PLEKHB1Q9UF11 243 aaPredicted RBP5.55□□□□□ -1.52
CHD8-207ENST00000554384 IPO11Q9UI26 975 aaKnown RBP5.55□□□□□ -1.52
CHD8-207ENST00000554384 SNAPC4Q5SXM2 1469 aa5.55□□□□□ -1.52
CHD8-207ENST00000554384 ADAM10O14672 748 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 STRNO43815 780 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 GUCY1B2O75343 617 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 NEURL1O76050 574 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 TFEBP19484 476 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 HOXD9P28356 352 aaPredicted RBP5.54□□□□□ -1.52
CHD8-207ENST00000554384 CIITAP33076 1130 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 RXRGP48443 463 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 CYP2J2P51589 502 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 CCR9P51686 369 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 UFM1P61960 85 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 CFHR1Q03591 330 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 SLC9B1Q4ZJI4 515 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 NEK8Q86SG6 692 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 ARMC8Q8IUR7 673 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 CNGA4Q8IV77 575 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 GHDCQ8N2G8 530 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 ZNF366Q8N895 744 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 TDRD7Q8NHU6 1098 aaKnown RBP5.54□□□□□ -1.52
CHD8-207ENST00000554384 HSPH1Q92598 858 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 EME1Q96AY2 570 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 ZNF419Q96HQ0 510 aaPredicted RBP5.54□□□□□ -1.52
CHD8-207ENST00000554384 OLA1Q9NTK5 396 aaKnown RBP5.54□□□□□ -1.52
CHD8-207ENST00000554384 TMEM184CQ9NVA4 438 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 ORC3Q9UBD5 711 aaPredicted RBP5.54□□□□□ -1.52
CHD8-207ENST00000554384 SYNJ1O43426 1573 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 SPATA31D1Q6ZQQ2 1576 aa5.54□□□□□ -1.52
CHD8-207ENST00000554384 KIF13AQ9H1H9 1805 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 A0A1W2PPC1 479 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 OR6C68A6NDL8 312 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 PABPN1LA6NDY0 278 aaKnown RBP5.53□□□□□ -1.52
CHD8-207ENST00000554384 TEX22C9J3V5 150 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 PPP6CO00743 305 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 USP12O75317 370 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 RBMXL2O75526 392 aaKnown RBP5.53□□□□□ -1.52
CHD8-207ENST00000554384 DDAH2O95865 285 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 ADAP00813 363 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 CYP19A1P11511 503 aaPredicted RBP5.53□□□□□ -1.52
CHD8-207ENST00000554384 EDN2P20800 178 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 ATP5F1P24539 256 aaPredicted RBP5.53□□□□□ -1.52
CHD8-207ENST00000554384 EPHA8P29322 1005 aaPredicted RBP5.53□□□□□ -1.52
CHD8-207ENST00000554384 ZNF91Q05481 1191 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 PLK5Q496M5 336 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 C5orf22Q49AR2 442 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 MIDNQ504T8 468 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 WDR78Q5VTH9 848 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 SLC2A7Q6PXP3 512 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 C17orf99Q6UX52 265 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 B4GALNT4Q76KP1 1039 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 ANKRD52Q8NB46 1076 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 CMASQ8NFW8 434 aaPredicted RBP5.53□□□□□ -1.52
CHD8-207ENST00000554384 ZG16BQ96DA0 208 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 BARD1Q99728 777 aaKnown RBP5.53□□□□□ -1.52
CHD8-207ENST00000554384 HIPK3Q9H422 1215 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 BLOC1S4Q9NUP1 217 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 BEX4Q9NWD9 120 aaPredicted RBP5.53□□□□□ -1.52
CHD8-207ENST00000554384 CTNNAL1Q9UBT7 734 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 DHDHQ9UQ10 334 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 LAMP3Q9UQV4 416 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 TOPBP1Q92547 1522 aa5.53□□□□□ -1.52
CHD8-207ENST00000554384 DDTLA6NHG4 134 aaPredicted RBP5.52□□□□□ -1.53
CHD8-207ENST00000554384 PRSS47A8MTI9 375 aa5.52□□□□□ -1.53
CHD8-207ENST00000554384 RHODO00212 210 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms