RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 FZD3Q9NPG1 666 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 ST7Q9NRC1 585 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 TPX2Q9ULW0 747 aaKnown RBP11.87□□□□□ -0.51
TUBB3-204ENST00000554116 CEP83Q9Y592 693 aa11.87□□□□□ -0.51
TUBB3-204ENST00000554116 UTP20O75691 2785 aaKnown RBP11.86□□□□□ -0.51
TUBB3-204ENST00000554116 TYW5A2RUC4 315 aaKnown RBP11.86□□□□□ -0.51
TUBB3-204ENST00000554116 TCAF2A6NFQ2 919 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 PRAMEF26H0Y7S4 382 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 K7ERQ8 282 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 SLC31A1O15431 190 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 OPA1O60313 960 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 MPOP05164 745 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 THEGLP0DJG4 465 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 SRCP12931 536 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 KRT5P13647 590 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 SLC9A1P19634 815 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 YWHAZP63104 245 aaKnown RBP11.86□□□□□ -0.51
TUBB3-204ENST00000554116 KCNMA1Q12791 1236 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 AUHQ13825 339 aaKnown RBP11.86□□□□□ -0.51
TUBB3-204ENST00000554116 FGL2Q14314 439 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 STAT4Q14765 748 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 EXOC3L4Q17RC7 722 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 C5orf22Q49AR2 442 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 CT47A1Q5JQC4 288 aaPredicted RBP11.86□□□□□ -0.51
TUBB3-204ENST00000554116 RNF219Q5W0B1 726 aaPredicted RBP11.86□□□□□ -0.51
TUBB3-204ENST00000554116 FAM114A1Q8IWE2 563 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 ZNF683Q8IZ20 524 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 SH2D3CQ8N5H7 860 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 OR13H1Q8NG92 308 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 OR2A12Q8NGT7 310 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 ZNF606Q8WXB4 792 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 VOPP1Q96AW1 172 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 BMFQ96LC9 184 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 SLC2A13Q96QE2 648 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 MYOCQ99972 504 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 CPNE5Q9HCH3 593 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 ASCL3Q9NQ33 180 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 GPR27Q9NS67 375 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 KLHL11Q9NVR0 708 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.86□□□□□ -0.514e-7■■■□□ 18.7
TUBB3-204ENST00000554116 HS3ST4Q9Y661 456 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 AHCTF1Q8WYP5 2266 aa11.86□□□□□ -0.51
TUBB3-204ENST00000554116 SPENQ96T58 3664 aaKnown RBP11.85□□□□□ -0.51
TUBB3-204ENST00000554116 A0A1W2PQU0 124 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 BECN2A8MW95 431 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 F5H5T6 163 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 SMAD6O43541 496 aaKnown RBP11.85□□□□□ -0.51
TUBB3-204ENST00000554116 SNAP91O60641 907 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 RNGTTO60942 597 aaKnown RBP11.85□□□□□ -0.51
TUBB3-204ENST00000554116 ZNF821O75541 412 aaPredicted RBP11.85□□□□□ -0.51
TUBB3-204ENST00000554116 PIAS2O75928 621 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 DXOO77932 396 aaKnown RBP11.85□□□□□ -0.51
TUBB3-204ENST00000554116 CNTN5O94779 1100 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 APOEP02649 317 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 CKMT1AP12532 417 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 NUDT1P36639 197 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 ACADSBP45954 432 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 UCNP55089 124 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 CLDN2P57739 230 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 E2F1Q01094 437 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 SULT2A1Q06520 285 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 MEA1Q16626 185 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 MAN2A1Q16706 1144 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 TMEM259Q4ZIN3 620 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 HSP90AA4PQ58FG1 418 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 SLC45A4Q5BKX6 768 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 TPRG1LQ5T0D9 272 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 GJB7Q6PEY0 223 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 TRIM65Q6PJ69 517 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 GCNT7Q6ZNI0 430 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 ENOSF1Q7L5Y1 443 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 TMC6Q7Z403 805 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 ABI3BPQ7Z7G0 1075 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 DEFB106AQ8N104 65 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 CHST14Q8NCH0 376 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 OR8D1Q8WZ84 308 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 KLHDC7BQ96G42 594 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 PRR11Q96HE9 360 aaPredicted RBP11.85□□□□□ -0.51
TUBB3-204ENST00000554116 NAF1Q96HR8 494 aaKnown RBP11.85□□□□□ -0.51
TUBB3-204ENST00000554116 FAM81BQ96LP2 452 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 CPXM1Q96SM3 734 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 LGMNQ99538 433 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 PREBQ9HCU5 417 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 KLF15Q9UIH9 416 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 VANGL2Q9ULK5 521 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 HS3ST2Q9Y278 367 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 TBC1D30Q9Y2I9 924 aa11.85□□□□□ -0.51
TUBB3-204ENST00000554116 GTPBP10A4D1E9 387 aaKnown RBP11.84□□□□□ -0.51
TUBB3-204ENST00000554116 PMS2P1A4D2B8 440 aa11.84□□□□□ -0.51
TUBB3-204ENST00000554116 ALOX15BO15296 676 aa11.84□□□□□ -0.51
TUBB3-204ENST00000554116 RAD51BO15315 384 aa11.84□□□□□ -0.51
TUBB3-204ENST00000554116 FFAR2O15552 330 aa11.84□□□□□ -0.51
TUBB3-204ENST00000554116 ARHGAP6O43182 974 aa11.84□□□□□ -0.51
TUBB3-204ENST00000554116 SART1O43290 800 aaKnown RBP11.84□□□□□ -0.51
TUBB3-204ENST00000554116 LZTS3O60299 673 aaPredicted RBP11.84□□□□□ -0.51
TUBB3-204ENST00000554116 LETM1O95202 739 aaPredicted RBP11.84□□□□□ -0.51
TUBB3-204ENST00000554116 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
TUBB3-204ENST00000554116 TFE3P19532 575 aaPredicted RBP11.84□□□□□ -0.51
TUBB3-204ENST00000554116 PON1P27169 355 aa11.84□□□□□ -0.51
TUBB3-204ENST00000554116 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms