RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 A0A1W2PR48 441 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 SLC38A8A6NNN8 435 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 HEPACAM2A8MVW5 462 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 PRR5-ARHGAP8B1AHC4 643 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 TMEM189-UBE2V1I3L0A0 370 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 CDX4O14627 284 aaPredicted RBP3.44□□□□□ -1.86
SLIRP-202ENST00000553981 ZNF185O15231 689 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 USO1O60763 962 aaKnown RBP3.44□□□□□ -1.86
SLIRP-202ENST00000553981 KCNK5O95279 499 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 LYPLA2O95372 231 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 C1RP00736 705 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 PRKCBP05771 671 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 RETP07949 1114 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 POU2F2P09086 479 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 HNRNPA1P09651 372 aaKnown RBP eCLIP3.44□□□□□ -1.86
SLIRP-202ENST00000553981 GNA11P29992 359 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 GDI1P31150 447 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 PTH2RP49190 550 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 RCAN1P53805 252 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 FAM193AP78312 1265 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 ARHGAP8P85298 464 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 SHC2P98077 582 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 ZXDBP98169 803 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 POU5F1BQ06416 359 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 SPAG1Q07617 926 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 TWF1Q12792 350 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 SIM2Q14190 667 aaPredicted RBP3.44□□□□□ -1.86
SLIRP-202ENST00000553981 PON2Q15165 354 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 IL17AQ16552 155 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 FAM187BQ17R55 369 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 PPP4R3AQ6IN85 833 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 SLC8B1Q6J4K2 584 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 SLC27A1Q6PCB7 646 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 MOXD1Q6UVY6 613 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 ZNF852Q6ZMS4 543 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 PIK3AP1Q6ZUJ8 805 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 KCNK18Q7Z418 384 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 TMEM150AQ86TG1 271 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 GLCCI1Q86VQ1 547 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 CATSPER3Q86XQ3 398 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 TPH2Q8IWU9 490 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 CPEB3Q8NE35 698 aaKnown RBP3.44□□□□□ -1.86
SLIRP-202ENST00000553981 GAB3Q8WWW8 586 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 ATRIPQ8WXE1 791 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 STAMQ92783 540 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 CAVIN3Q969G5 261 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 ORAI3Q9BRQ5 295 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 NFKBIZQ9BYH8 718 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 FSCN3Q9NQT6 498 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 SH3GLB2Q9NR46 395 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.44□□□□□ -1.863e-8■■■□□ 16
SLIRP-202ENST00000553981 USP36Q9P275 1121 aaKnown RBP3.44□□□□□ -1.86
SLIRP-202ENST00000553981 FBXL5Q9UKA1 691 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 TPCN1Q9ULQ1 816 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 CCL26Q9Y258 94 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 ZKSCAN5Q9Y2L8 839 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 GDAQ9Y2T3 454 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 PIAS3Q9Y6X2 628 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 CFAP47Q6ZTR5 3102 aa3.44□□□□□ -1.86
SLIRP-202ENST00000553981 HELZP42694 1942 aaKnown RBP3.44□□□□□ -1.86
SLIRP-202ENST00000553981 SCN1AP35498 2009 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 NUP205Q92621 2012 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 TPRP12270 2363 aaKnown RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 SMIM28A0A1B0GU29 152 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 PIPSLA2A3N6 862 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 MYBPHLA2RUH7 354 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 UNC119BA6NIH7 251 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 LRRIQ4A6NIV6 560 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 SRRM3A6NNA2 597 aaPredicted RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 BTBD18B2RXH4 712 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 DIRC3C9JPN6 131 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 SPECC1L-ADORA2AF8WAN1 911 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 PPP1R12AO14974 1030 aaPredicted RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ASAP2O43150 1006 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 HCRTO43612 131 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 FAM189A1O60320 539 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 CCNT1O60563 726 aaKnown RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 JAK2O60674 1132 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 B3GAT3O94766 335 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ERLIN2O94905 339 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 EPN2O95208 641 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 PAPSS2O95340 614 aaPredicted RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 EGFP01133 1207 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 THP07101 528 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 PROS1P07225 676 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ZNF806P0C7X5 589 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 HKR1P10072 659 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ARSAP15289 507 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 PTPN2P17706 415 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 PSMC3P17980 439 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ATF6P18850 670 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 BCKDHBP21953 392 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 XPAP23025 273 aaPredicted RBP3.43□□□□□ -1.86
SLIRP-202ENST00000553981 AXLP30530 894 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 TNFSF9P41273 254 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 CXCL12P48061 93 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 GPR15P49685 360 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 LIMK1P53667 647 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 ARPP19P56211 112 aa3.43□□□□□ -1.86
SLIRP-202ENST00000553981 OSTNP61366 133 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms