RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 GRPEL1Q9HAV7 217 aa9.54□□□□□ -0.88
CHD8-206ENST00000553870 PCDH18Q9HCL0 1135 aa9.54□□□□□ -0.88
CHD8-206ENST00000553870 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHD8-206ENST00000553870 GMEB2Q9UKD1 530 aa9.54□□□□□ -0.88
CHD8-206ENST00000553870 NCKAP1Q9Y2A7 1128 aa9.54□□□□□ -0.88
CHD8-206ENST00000553870 PCDHGA5Q9Y5G8 931 aa9.54□□□□□ -0.88
CHD8-206ENST00000553870 CKAP5Q14008 2032 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 IGHV1OR15-9A0A0B4J2B8 117 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 DCLK1O15075 740 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 BUB1O43683 1085 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 FOXD2O60548 495 aaPredicted RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 GFRA3O60609 400 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 NDUFS2O75306 463 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 ADH1BP00325 375 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 MT-CO1P00395 513 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 TCF4P15884 667 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 IL4RP24394 825 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 CD6P30203 668 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 SERPINB6P35237 376 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 ACVRL1P37023 503 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 RECQLP46063 649 aaPredicted RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 STK19P49842 368 aaPredicted RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 MRE11P49959 708 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 TPMTP51580 245 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 ARSEP51690 589 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 VAV2P52735 878 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 TAS2R40P59535 323 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 SRSF5Q13243 272 aaKnown RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 KRT81Q14533 505 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 RFTN1Q14699 578 aaPredicted RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 IFI16Q16666 785 aaKnown RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 SMTNL2Q2TAL5 461 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 DAB2IPQ5VWQ8 1189 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 PMS2CLQ68D20 193 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 TXNRD3NBQ6F5E7 133 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 TMCO3Q6UWJ1 677 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 RAD9BQ6WBX8 426 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 LPCAT2Q7L5N7 544 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 RHOT1Q8IXI2 618 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 FAM160A2Q8N612 972 aaPredicted RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 ZNF366Q8N895 744 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 TMIEQ8NEW7 156 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 CADM4Q8NFZ8 388 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 OR8D1Q8WZ84 308 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 FOXJ1Q92949 421 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 HMCESQ96FZ2 354 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 ZNF419Q96HQ0 510 aaPredicted RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 LRIG1Q96JA1 1093 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 CSPG4P5Q96PW8 444 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 PHOX2BQ99453 314 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 ZNF670Q9BS34 389 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 KLC2Q9H0B6 622 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 SGK2Q9HBY8 427 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 DDX56Q9NY93 547 aaKnown RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 WSB2Q9NYS7 404 aaPredicted RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 PPM1HQ9ULR3 514 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 FZD4Q9ULV1 537 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 TPX2Q9ULW0 747 aaKnown RBP9.53□□□□□ -0.88
CHD8-206ENST00000553870 ALG6Q9Y672 507 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 WDFY4Q6ZS81 3184 aa9.53□□□□□ -0.88
CHD8-206ENST00000553870 TMEM110-MUSTN1A8MSY1 372 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 C1QTNF3-AMACRE9PGA6 284 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 ARHGAP6O43182 974 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 SMAD6O43541 496 aaKnown RBP9.52□□□□□ -0.89
CHD8-206ENST00000553870 PSTPIP1O43586 416 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 NRDCO43847 1150 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 PRAMEF11O60813 436 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 CD160O95971 181 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 GSRP00390 522 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 PRNPP04156 253 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 AMPD1P23109 780 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 GLDCP23378 1020 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 KDELR1P24390 212 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 SLC8A1P32418 973 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 HOXD12P35452 270 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 SNRPD1P62314 119 aaKnown RBP9.52□□□□□ -0.89
CHD8-206ENST00000553870 RAD51Q06609 339 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 KIF5AQ12840 1032 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 DPYSL3Q14195 570 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 CST6Q15828 149 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 ANKRD20A8PQ5CZ79 823 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 CARD16Q5EG05 197 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 C11orf63Q6NUN7 778 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 ASCL5Q7RTU5 278 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 KIAA1328Q86T90 577 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 ZNF354CQ86Y25 554 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 MMAAQ8IVH4 418 aaKnown RBP9.52□□□□□ -0.89
CHD8-206ENST00000553870 STK40Q8N2I9 435 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 OR2A12Q8NGT7 310 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 RLN3Q8WXF3 142 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 ANP32BQ92688 251 aaKnown RBP9.52□□□□□ -0.89
CHD8-206ENST00000553870 FAF2Q96CS3 445 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 TOE1Q96GM8 510 aaKnown RBP9.52□□□□□ -0.89
CHD8-206ENST00000553870 ZNF599Q96NL3 588 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 HEPHQ9BQS7 1158 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 SLC39A8Q9C0K1 460 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 BTBD1Q9H0C5 482 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 PABPC3Q9H361 631 aaKnown RBP9.52□□□□□ -0.89
CHD8-206ENST00000553870 KDM4CQ9H3R0 1056 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 MTG2Q9H4K7 406 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms