RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 DGKKQ5KSL6 1271 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 EMC10Q5UCC4 262 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 RETSATQ6NUM9 610 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 LINGO4Q6UY18 593 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 SYNPOQ8N3V7 929 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 SH2D3CQ8N5H7 860 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 PRELID2Q8N945 189 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 PJA1Q8NG27 643 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 USP33Q8TEY7 942 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 LRRN4Q8WUT4 740 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 MAIP1Q8WWC4 291 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 CLDN23Q96B33 292 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 ZNF599Q96NL3 588 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 NELL2Q99435 816 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 FAM118BQ9BPY3 351 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 FRMD8P1Q9BZ68 369 aaPredicted RBP18.4■□□□□ 0.54
PSEN1-208ENST00000553719 TMEM245Q9H330 911 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 RBM12Q9NTZ6 932 aaKnown RBP18.4■□□□□ 0.54
PSEN1-208ENST00000553719 NDRG2Q9UN36 371 aaKnown RBP18.4■□□□□ 0.54
PSEN1-208ENST00000553719 CKAP5Q14008 2032 aa18.4■□□□□ 0.54
PSEN1-208ENST00000553719 HACD1B0YJ81 288 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 PDE2AO00408 941 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 PPP1R12AO14974 1030 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 SMAD6O43541 496 aaKnown RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 ATP9BO43861 1147 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 RNF40O75150 1001 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 ZNF821O75541 412 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 PDGFBP01127 241 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 CLCN6P51797 869 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 SLC20A2Q08357 652 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 ZNF234Q14588 700 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 OASLQ15646 514 aaKnown RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 CYP1B1Q16678 543 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 INO80DQ53TQ3 878 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 CCDC181Q5TID7 509 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 DRICH1Q6PGQ1 229 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 ADAT2Q7Z6V5 191 aaKnown RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 CCDC13Q8IYE1 715 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 ZNF513Q8N8E2 541 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 C12orf50Q8NA57 414 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 FRS2Q8WU20 508 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 UCMAQ8WVF2 138 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 CASKIN2Q8WXE0 1202 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 ATG4AQ8WYN0 398 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 NKD2Q969F2 451 aaPredicted RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 RPL10LQ96L21 214 aaKnown RBP18.39■□□□□ 0.53
PSEN1-208ENST00000553719 ACOX2Q99424 681 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 SP110Q9HB58 689 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 RNF14Q9UBS8 474 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 SLCO3A1Q9UIG8 710 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 HPCAL4Q9UM19 191 aa18.39■□□□□ 0.53
PSEN1-208ENST00000553719 K7ERQ8 282 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 MCF2LO15068 1137 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 NPC1O15118 1278 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 MATN3O15232 486 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 LIASO43766 372 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 RBP3P10745 1247 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 IL12RB1P42701 662 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 GEMIN4P57678 1058 aaKnown RBP18.38■□□□□ 0.53
PSEN1-208ENST00000553719 EIF3EP60228 445 aaKnown RBP18.38■□□□□ 0.53
PSEN1-208ENST00000553719 IFI35P80217 286 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-208ENST00000553719 MRPS21P82921 87 aaKnown RBP18.38■□□□□ 0.53
PSEN1-208ENST00000553719 LRRC32Q14392 662 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 UBXN2BQ14CS0 331 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 CCNG2Q16589 344 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 SLC45A4Q5BKX6 768 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 TIGD7Q6NT04 549 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-208ENST00000553719 Q6ZS52 159 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 ZC3H18Q86VM9 953 aaKnown RBP18.38■□□□□ 0.53
PSEN1-208ENST00000553719 TEX26Q8N6G2 289 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 IL17RCQ8NAC3 791 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 NAP1L3Q99457 506 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-208ENST00000553719 GABRG3Q99928 467 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 CD248Q9HCU0 757 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 ZDHHC4Q9NPG8 344 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 UBA2Q9UBT2 640 aaPredicted RBP18.38■□□□□ 0.53
PSEN1-208ENST00000553719 SLC25A13Q9UJS0 675 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 DNPEPQ9ULA0 475 aa18.38■□□□□ 0.53
PSEN1-208ENST00000553719 BCLAF3A2AJT9 711 aaKnown RBP18.37■□□□□ 0.53
PSEN1-208ENST00000553719 FAM170BA6NMN3 283 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 CHURC1-FNTBB4DL54 471 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 ADAM23O75077 832 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 TMCC1O94876 653 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 RPS9P46781 194 aaKnown RBP18.37■□□□□ 0.53
PSEN1-208ENST00000553719 SEC13P55735 322 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 SLC10A7Q0GE19 358 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 ZBTB17Q13105 803 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 HNRNPDQ14103 355 aaKnown RBP18.37■□□□□ 0.53
PSEN1-208ENST00000553719 GAS6Q14393 721 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 RFTN1Q14699 578 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-208ENST00000553719 CYTH1Q15438 398 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 HSF5Q4G112 596 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-208ENST00000553719 TMCO4Q5TGY1 634 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 PKN3Q6P5Z2 889 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 LEKR1Q6ZMV7 388 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 ZNF572Q7Z3I7 529 aaPredicted RBP18.37■□□□□ 0.53
PSEN1-208ENST00000553719 ZNF354CQ86Y25 554 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 CCDC26Q8TAB7 109 aa18.37■□□□□ 0.53
PSEN1-208ENST00000553719 TFB1MQ8WVM0 346 aaKnown RBP18.37■□□□□ 0.53
PSEN1-208ENST00000553719 C1orf54Q8WWF1 131 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms