RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 TMEM248Q9NWD8 314 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 NSMCE4AQ9NXX6 385 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 BFARQ9NZS9 450 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 AFF4Q9UHB7 1163 aaKnown RBP7.47□□□□□ -1.21
ATXN3-221ENST00000553498 TBK1Q9UHD2 729 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 RSPH14Q9UHP6 348 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 SSX2IPQ9Y2D8 614 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 EVPLQ92817 2033 aa7.47□□□□□ -1.21
ATXN3-221ENST00000553498 ARHGAP42A6NI28 874 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 DRGXA6NNA5 263 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 E9PAM4 449 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 I6L893 689 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 BNIP3LO60238 219 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 USP1O94782 785 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 ARHGEF15O94989 841 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 ASMTLO95671 621 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 C1QAP02745 245 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 SOD2P04179 222 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 CLTBP09497 229 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 OR4Q2P0C623 313 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 CSH1P0DML2 217 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 CSH2P0DML3 217 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 KRT4P19013 534 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 DRD4P21917 467 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 CA4P22748 312 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 HADHAP40939 763 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 RENBPP51606 427 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 SEC24CP53992 1094 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 DSG1Q02413 1049 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 SLC18A2Q05940 514 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 CDH17Q12864 832 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 PLD1Q13393 1074 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 HNRNPDQ14103 355 aaKnown RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 BTG3Q14201 252 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 PSMD5Q16401 504 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 DDR2Q16832 855 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 KCTD19Q17RG1 926 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 KBTBD12Q3ZCT8 623 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 PARP15Q460N3 678 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 TRIM60Q495X7 471 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 C5orf22Q49AR2 442 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 RTP2Q5QGT7 225 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 KCTD11Q693B1 232 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 TTC19Q6DKK2 380 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 KIAA1841Q6NSI8 718 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 FBXO46Q6PJ61 603 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 LYPD4Q6UWN0 246 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 UNC5AQ6ZN44 842 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 MARK2Q7KZI7 788 aaKnown RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 PIGWQ7Z7B1 504 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 TRIM42Q8IWZ5 723 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 GBP7Q8N8V2 638 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 ATAD1Q8NBU5 361 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 CCDC197Q8NCU1 140 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 GABPB2Q8TAK5 448 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 RAB3IL1Q8TBN0 382 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 MDM1Q8TC05 714 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 DENND1AQ8TEH3 1009 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 MZB1Q8WU39 189 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 NSMCE1Q8WV22 266 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 TOP1MTQ969P6 601 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 PBXIP1Q96AQ6 731 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 ARMC5Q96C12 935 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF689Q96CS4 500 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 TRMT2BQ96GJ1 504 aaKnown RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 IGSF21Q96ID5 467 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF333Q96JL9 665 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 CABS1Q96KC9 395 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 MYRFLQ96LU7 910 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF558Q96NG5 402 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 IL12RB2Q99665 862 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 DDX50Q9BQ39 737 aaKnown RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 HERC2P3Q9BVR0 1158 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 MAGEB5Q9BZ81 275 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 CASS4Q9NQ75 786 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 VPS45Q9NRW7 570 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 TMEM39AQ9NV64 488 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 MARCH2Q9P0N8 246 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 SEPT10Q9P0V9 454 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 GMIPQ9P107 970 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 UXTQ9UBK9 157 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-221ENST00000553498 CTNNAL1Q9UBT7 734 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 NEU3Q9UQ49 428 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 TTLL3Q9Y4R7 772 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 HS3ST4Q9Y661 456 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 MAD1L1Q9Y6D9 718 aa7.46□□□□□ -1.22
ATXN3-221ENST00000553498 FAM237BA0A1B0GVD1 139 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 SLC38A8A6NNN8 435 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 KCNK1O00180 336 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 MAFKO60675 156 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 AVILO75366 819 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 NEBLO76041 1014 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ABLIM3O94929 683 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 MAP3K6O95382 1288 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 LATS1O95835 1130 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 IL1BP01584 269 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 VIMP08670 466 aaKnown RBP7.45□□□□□ -1.22
ATXN3-221ENST00000553498 ALADP13716 330 aa7.45□□□□□ -1.22
ATXN3-221ENST00000553498 CCNB1P14635 433 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms