RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 OR51B4Q9Y5P0 310 aa9.32□□□□□ -0.92
SYNE2-209ENST00000553308 MGAQ8IWI9 3026 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 COL6A6A6NMZ7 2263 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 A0A1W2PQ27 194 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 A0A1W2PQ64 194 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 A6NNZ2 444 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 K7ERQ8 282 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 SCAMP1O15126 338 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 SLC28A2O43868 658 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 LZTS3O60299 673 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-209ENST00000553308 SNAP91O60641 907 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 PCDH8O95206 1070 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 MT-CO1P00395 513 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 CENPBP07199 599 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-209ENST00000553308 SRCP12931 536 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 CHRNA3P32297 505 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 OXCT1P55809 520 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 LRRC63Q05C16 580 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 AUHQ13825 339 aaKnown RBP9.31□□□□□ -0.92
SYNE2-209ENST00000553308 CDKN3Q16667 212 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 COBLL1Q53SF7 1204 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 ZNF658Q5TYW1 1059 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-209ENST00000553308 NEK5Q6P3R8 708 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 GUSBP11Q6P575 273 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 CRTC1Q6UUV9 634 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 Q6ZSR6 202 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 ABI3BPQ7Z7G0 1075 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 CHST14Q8NCH0 376 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 ZNF548Q8NEK5 533 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-209ENST00000553308 OR2A12Q8NGT7 310 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 GRIN3AQ8TCU5 1115 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 RNF34Q969K3 372 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 MED8Q96G25 268 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 ATXN7L3BQ96GX2 97 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 PSMB7Q99436 277 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 METTL14Q9HCE5 456 aaKnown RBP9.31□□□□□ -0.92
SYNE2-209ENST00000553308 GPR27Q9NS67 375 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 DDIT4Q9NX09 232 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 SLC12A6Q9UHW9 1150 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 VANGL2Q9ULK5 521 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 HS3ST2Q9Y278 367 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 SSUH2Q9Y2M2 353 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 ZDHHC9Q9Y397 364 aa9.31□□□□□ -0.92
SYNE2-209ENST00000553308 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 CPED1A4D0V7 1026 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 POM121BA6NF01 834 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 NEMP2A6NFY4 417 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 K7ENP7 123 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 CASC3O15234 703 aaKnown RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 PMM2O15305 246 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 RAD51BO15315 384 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 ARHGAP6O43182 974 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 SMAD6O43541 496 aaKnown RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 GRAP2O75791 330 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 LETM1O95202 739 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 SLC2A3P11169 496 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 KRT5P13647 590 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 RRM1P23921 792 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 RBMS1P29558 406 aaKnown RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 CCR1P32246 355 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 DUSP3P51452 185 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 HNRNPKP61978 463 aaKnown RBP eCLIP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 SKOR1P84550 965 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 GCNT1Q02742 428 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 ZNF177Q13360 481 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 PDCLQ13371 301 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 FGL2Q14314 439 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 FZD2Q14332 565 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 DRAP1Q14919 205 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 CCDC40Q4G0X9 1142 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 TMEM259Q4ZIN3 620 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 ZCCHC8Q6NZY4 707 aaKnown RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 INO80CQ6PI98 192 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 FOXR1Q6PIV2 292 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 IGF2-ASQ6U949 168 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 LINGO4Q6UY18 593 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 EFL1Q7Z2Z2 1120 aaKnown RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 C14orf80Q86SX3 495 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 TMEM110Q86TL2 294 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 DEFB106AQ8N104 65 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 ATP11CQ8NB49 1132 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 STK32AQ8WU08 396 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 IFT43Q96FT9 208 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 PRR11Q96HE9 360 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-209ENST00000553308 BMFQ96LC9 184 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 SLC46A1Q96NT5 459 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 SLC2A13Q96QE2 648 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 MED15Q96RN5 788 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 DUSP23Q9BVJ7 150 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 MUC3BQ9H195 1237 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 THAP9Q9H5L6 903 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 USP29Q9HBJ7 922 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 GDPD2Q9HCC8 539 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 ACP6Q9NPH0 428 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 DYRK4Q9NR20 520 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 EVA1BQ9NVM1 165 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 RMND1Q9NWS8 449 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 VPS51Q9UID3 782 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 KLF15Q9UIH9 416 aa9.3□□□□□ -0.92
SYNE2-209ENST00000553308 CNTN6Q9UQ52 1028 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms