RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 MAGEH1Q9H213 219 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PPCSQ9HAB8 311 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 DNMT3BQ9UBC3 853 aaKnown RBP19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 TTLL3Q9Y4R7 772 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 MAD1L1Q9Y6D9 718 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 TRAV19A0A0A6YYK7 116 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 A0A1B0GVM2 712 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 TCAF2A6NFQ2 919 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 POC1B-GALNT4F8VUJ3 575 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PER2O15055 1255 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PRAMEF11O60813 436 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 MT-CYBP00156 380 aaPredicted RBP19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PFKLP17858 780 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 MGAT1P26572 445 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PBX2P40425 430 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 GEMIN4P57678 1058 aaKnown RBP19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 CRADDP78560 199 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 GNA12Q03113 381 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 GPM6BQ13491 265 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 MARC1Q5VT66 337 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PDE12Q6L8Q7 609 aaKnown RBP19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 FAM217AQ8IXS0 508 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 SHKBP1Q8TBC3 707 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PABPC5Q96DU9 382 aaKnown RBP19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 GCNAQ96QF7 691 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 DHRS4Q9BTZ2 278 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 LRRC40Q9H9A6 602 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 PDFQ9HBH1 243 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 TBK1Q9UHD2 729 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 SLC24A2Q9UI40 661 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 TBC1D30Q9Y2I9 924 aa19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 AAR2Q9Y312 384 aaKnown RBP19.93■□□□□ 0.78
RBFOX1-215ENST00000553186 MOSPD3O75425 235 aa19.92■□□□□ 0.78
RBFOX1-215ENST00000553186 HOXD9P28356 352 aaPredicted RBP19.92■□□□□ 0.78
RBFOX1-215ENST00000553186 ATP1A2P50993 1020 aa19.92■□□□□ 0.78
RBFOX1-215ENST00000553186 KLHL38Q2WGJ6 581 aa19.92■□□□□ 0.78
RBFOX1-215ENST00000553186 EXOC3L1Q86VI1 746 aa19.92■□□□□ 0.78
RBFOX1-215ENST00000553186 ZNF354CQ86Y25 554 aa19.92■□□□□ 0.78
RBFOX1-215ENST00000553186 TCEAL4Q96EI5 215 aa19.92■□□□□ 0.78
RBFOX1-215ENST00000553186 STAMBPL1Q96FJ0 436 aa19.92■□□□□ 0.78
RBFOX1-215ENST00000553186 CEP290O15078 2479 aa19.92■□□□□ 0.78
RBFOX1-215ENST00000553186 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 GSTA2P09210 222 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 PTPN2P17706 415 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 TTC39BQ5VTQ0 682 aaPredicted RBP19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 HTR3DQ70Z44 454 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 SETD3Q86TU7 594 aaPredicted RBP19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 PRPF39Q86UA1 669 aaKnown RBP19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 CYTH2Q99418 400 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 MTCL1Q9Y4B5 1905 aaKnown RBP19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 ILVBLA1L0T0 632 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 FOXO6A8MYZ6 492 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 PSMD3O43242 534 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 ANXA9O76027 345 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 PPP2R2AP63151 447 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 ZNF177Q13360 481 aaPredicted RBP19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 KBTBD12Q3ZCT8 623 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 STEAP4Q687X5 459 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 CXorf57Q6NSI4 855 aaKnown RBP19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 OR7D4Q8NG98 312 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 SYBUQ9NX95 663 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 CFAP97Q9P2B7 532 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 HCFC2Q9Y5Z7 792 aa19.91■□□□□ 0.78
RBFOX1-215ENST00000553186 DENND4CQ5VZ89 1909 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 RHOP08100 348 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 HNRNPA1P09651 372 aaKnown RBP eCLIP19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 PRKCHP24723 683 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 STX2P32856 288 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 NUMBP49757 651 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 NAPEPLDQ6IQ20 393 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 GSDMBQ8TAX9 411 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 PPP1R2P1Q96PQ5 205 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 PAFAH2Q99487 392 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 APOL2Q9BQE5 337 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 SLC25A51Q9H1U9 297 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 NT5MQ9NPB1 228 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 NEBLO76041 1014 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 FGF19O95750 216 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 ATP5DP30049 168 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 SLC5A9Q2M3M2 681 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 CASC4Q6P4E1 433 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 ADGRD1Q6QNK2 874 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 ADGRD2Q7Z7M1 963 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 CCNJLQ8IV13 435 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 PGBD5Q8N414 524 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 ARFGAP2Q8N6H7 521 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 IMP4Q96G21 291 aaKnown RBP19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 CERS4Q9HA82 394 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 PSD3Q9NYI0 1048 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 MOCS1Q9NZB8 636 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 PSMC3IPQ9P2W1 217 aaPredicted RBP19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 LSM7Q9UK45 103 aaKnown RBP19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 PRDM4Q9UKN5 801 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 ARHGAP26Q9UNA1 814 aa19.9■□□□□ 0.78
RBFOX1-215ENST00000553186 CHD5Q8TDI0 1954 aa19.89■□□□□ 0.78
RBFOX1-215ENST00000553186 DOCK6Q96HP0 2047 aa19.89■□□□□ 0.78
RBFOX1-215ENST00000553186 TRANK1O15050 2925 aa19.89■□□□□ 0.77
RBFOX1-215ENST00000553186 ADRA1AP35348 466 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms