RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 KIAA1549LQ6ZVL6 1849 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 PATJQ8NI35 1801 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 FANCMQ8IYD8 2048 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 MYO16Q9Y6X6 1858 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 A0A0U1RQF3 1178 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 CCDC194A0A1B0GVG4 234 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 NEMFO60524 1076 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 RPS6KA5O75582 802 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 DDHD2O94830 711 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 ZRANB2O95218 330 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 CD1AP06126 327 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 CENPBP07199 599 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 CCND1P24385 295 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 CDC25AP30304 524 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 YWHABP31946 246 aaKnown RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 CTNNB1P35222 781 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 ADKP55263 362 aaKnown RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 PTENP60484 403 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 AKAP17AQ02040 695 aaKnown RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 DSC1Q08554 894 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 LAMTOR4Q0VGL1 99 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 GPM6BQ13491 265 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 RABEP1Q15276 862 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 GEN1Q17RS7 908 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 HYIQ5T013 277 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 NCAPH2Q6IBW4 605 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 CD300LGQ6UXG3 332 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 USP49Q70CQ1 688 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 MRPL10Q7Z7H8 261 aaKnown RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 CDR2LQ86X02 465 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 ZNF575Q86XF7 245 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 ZNF280BQ86YH2 543 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 SLC39A11Q8N1S5 342 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 COLGALT1Q8NBJ5 622 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 PRPF31Q8WWY3 499 aaKnown RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 P2RX5Q93086 422 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 FIZ1Q96SL8 496 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 YME1L1Q96TA2 773 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 KIFC3Q9BVG8 833 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 FOXP1Q9H334 677 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 ELAC1Q9H777 363 aaKnown RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 TTC12Q9H892 705 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 POLD4Q9HCU8 107 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 TYW1Q9NV66 732 aaKnown RBP5.35□□□□□ -1.55
SCAF11-214ENST00000550893 TMEM161AQ9NX61 479 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 MIOSQ9NXC5 875 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 CALCOCO1Q9P1Z2 691 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 DNAJB4Q9UDY4 337 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 SLC45A2Q9UMX9 530 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 GINS2Q9Y248 185 aa5.35□□□□□ -1.55
SCAF11-214ENST00000550893 ZMYM2Q9UBW7 1377 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 HIDE1A8MVS5 230 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 H3BQ06 376 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-214ENST00000550893 PTGESO14684 152 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 MAGEB2O15479 319 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 FAM189A1O60320 539 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 SLC43A1O75387 559 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 OFD1O75665 1012 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 OR52Z1P0C646 297 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 ARF4P18085 180 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-214ENST00000550893 GJB2P29033 226 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 DSC2Q02487 901 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 CALCRLQ16602 461 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 LEXMQ3ZCV2 418 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 TMEM119Q4V9L6 283 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 FAM173BQ6P4H8 233 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 SYCE2Q6PIF2 218 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 Q6ZNX1 250 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 SLC24A5Q71RS6 500 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 ZNF410Q86VK4 478 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 COLGALT2Q8IYK4 626 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 METTL13Q8N6R0 699 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 SUSD6Q92537 303 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 PTCD3Q96EY7 689 aaKnown RBP5.34□□□□□ -1.55
SCAF11-214ENST00000550893 C8orf76Q96K31 380 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 KLHL32Q96NJ5 620 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 VRK1Q99986 396 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-214ENST00000550893 PAAF1Q9BRP4 392 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 AIFM2Q9BRQ8 373 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 POLR3CQ9BUI4 534 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-214ENST00000550893 FTHL17Q9BXU8 183 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 PACSIN1Q9BY11 444 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 TMEM117Q9H0C3 514 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 ZBP1Q9H171 429 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 NXF3Q9H4D5 531 aaKnown RBP5.34□□□□□ -1.55
SCAF11-214ENST00000550893 BLOC1S4Q9NUP1 217 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 TBC1D13Q9NVG8 400 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 JKAMPQ9P055 326 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 SUCLA2Q9P2R7 463 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-214ENST00000550893 CDYLQ9Y232 598 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 HES2Q9Y543 173 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 CFAP20Q9Y6A4 193 aaKnown RBP5.34□□□□□ -1.55
SCAF11-214ENST00000550893 ANAPC1Q9H1A4 1944 aa5.34□□□□□ -1.55
SCAF11-214ENST00000550893 NUP210Q8TEM1 1887 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-214ENST00000550893 PIEZO1Q92508 2521 aa5.34□□□□□ -1.56
SCAF11-214ENST00000550893 LAMA1P25391 3075 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 HELZP42694 1942 aaKnown RBP5.33□□□□□ -1.56
SCAF11-214ENST00000550893 CNTNAP2Q9UHC6 1331 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 E9PMD0 336 aa5.33□□□□□ -1.56
SCAF11-214ENST00000550893 USO1O60763 962 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms