RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 PEX11BO96011 259 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 JCHAINP01591 159 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 UQCRHP07919 91 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 ZSCAN5DPP0CG00 497 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 PABPC1P11940 636 aaKnown RBP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 MZF1P28698 734 aaPredicted RBP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 GDI1P31150 447 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 HSPA9P38646 679 aaKnown RBP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 EIF2DP41214 584 aaKnown RBP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 GRM2Q14416 872 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 TRIP13Q15645 432 aaPredicted RBP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 PARP6Q2NL67 630 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 PLEKHG6Q3KR16 790 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 INO80DQ53TQ3 878 aaPredicted RBP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 B4GALNT4Q76KP1 1039 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 PID1Q7Z2X4 250 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 KIAA0907Q7Z7F0 614 aaPredicted RBP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 AHI1Q8N157 1196 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 ZNF567Q8N184 647 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 CCDC110Q8TBZ0 833 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 WFDC5Q8TCV5 224 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 PLA2G2FQ9BZM2 168 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 HPS4Q9NQG7 708 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 ABCB8Q9NUT2 735 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 RBM22Q9NW64 420 aaKnown RBP eCLIP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 SEPT3Q9UH03 358 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 GGA2Q9UJY4 613 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 RAB21Q9UL25 225 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 TPX2Q9ULW0 747 aaKnown RBP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 SLC27A6Q9Y2P4 619 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 GOLGA6CA6NDK9 693 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 GOLGA6BA6NDN3 693 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 J3KR12 359 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 CBX4O00257 560 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 DNALI1O14645 258 aaPredicted RBP17.73■□□□□ 0.43
LETMD1-220ENST00000549686 ZMPSTE24O75844 475 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 SEC31AO94979 1220 aaKnown RBP17.73■□□□□ 0.43
LETMD1-220ENST00000549686 GOLGA6DP0CG33 693 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 ETS1P14921 441 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 IVDP26440 423 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 HLA-FP30511 346 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 CD70P32970 193 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 MMP13P45452 471 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 RPL21P46778 160 aaKnown RBP17.73■□□□□ 0.43
LETMD1-220ENST00000549686 VPS41P49754 854 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 LBRQ14739 615 aaKnown RBP17.73■□□□□ 0.43
LETMD1-220ENST00000549686 ITPRIPL2Q3MIP1 535 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 PITRM1Q5JRX3 1037 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 ETFBKMTQ8IXQ9 262 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 GLIS1Q8NBF1 620 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 LRRN4Q8WUT4 740 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 ZFYVE19Q96K21 471 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 PARD6BQ9BYG5 372 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 TRIM31Q9BZY9 425 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 GBA3Q9H227 469 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 DPH5Q9H2P9 285 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 BRD9Q9H8M2 597 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 TRPV5Q9NQA5 729 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 DNAJC17Q9NVM6 304 aaKnown RBP17.73■□□□□ 0.43
LETMD1-220ENST00000549686 GOLGA6AQ9NYA3 693 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 CLEC4EQ9ULY5 219 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 SNX24Q9Y343 169 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 DOCK8Q8NF50 2099 aa17.73■□□□□ 0.43
LETMD1-220ENST00000549686 CES1P23141 567 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 MAGEA6P43360 314 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 DGKGP49619 791 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 ZBTB17Q13105 803 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 PRPSAP1Q14558 356 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 ZNF235Q14590 738 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 MORF4L2Q15014 288 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 IZUMO3Q5VZ72 239 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 GRAMD4Q6IC98 578 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 PTCRAQ6ISU1 281 aaPredicted RBP17.72■□□□□ 0.43
LETMD1-220ENST00000549686 HOOK3Q86VS8 718 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 PPIL6Q8IXY8 311 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 EXOC4Q96A65 974 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 PNKPQ96T60 521 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 FRMD8Q9BZ67 464 aaPredicted RBP17.72■□□□□ 0.43
LETMD1-220ENST00000549686 FOXP3Q9BZS1 431 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 RAB6BQ9NRW1 208 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 DEC1Q9P2X7 70 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 RSPH14Q9UHP6 348 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 VPS51Q9UID3 782 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 SHOC2Q9UQ13 582 aa17.72■□□□□ 0.43
LETMD1-220ENST00000549686 BRWD1Q9NSI6 2320 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 ESYT3A0FGR9 886 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 ERI2A8K979 691 aaKnown RBP17.71■□□□□ 0.43
LETMD1-220ENST00000549686 ARNTLO00327 626 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 ZBTB24O43167 697 aaPredicted RBP17.71■□□□□ 0.43
LETMD1-220ENST00000549686 PSMD3O43242 534 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 TIMM44O43615 452 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 TULP3O75386 442 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 ASLP04424 464 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 CISD3P0C7P0 127 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 VASPP50552 380 aaPredicted RBP17.71■□□□□ 0.43
LETMD1-220ENST00000549686 ARF5P84085 180 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 CDK16Q00536 496 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 SEMA5AQ13591 1074 aa17.71■□□□□ 0.43
LETMD1-220ENST00000549686 HLTFQ14527 1009 aaKnown RBP eCLIP17.71■□□□□ 0.43
LETMD1-220ENST00000549686 BRD3Q15059 726 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms