RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 DNERQ8NFT8 737 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 SLC7A14Q8TBB6 771 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 CPB2Q96IY4 423 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 MRPL45Q9BRJ2 306 aaKnown RBP13.97□□□□□ -0.17
HDAC7-228ENST00000548938 COQ10BQ9H8M1 238 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 TMPRSS4Q9NRS4 437 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 KIAA1257Q9ULG3 409 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 CDYLQ9Y232 598 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 NME7Q9Y5B8 376 aa13.97□□□□□ -0.17
HDAC7-228ENST00000548938 WDR90Q96KV7 1748 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 ARHGEF37A1IGU5 675 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 TCAF2A6NFQ2 919 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 H2AFYO75367 372 aaKnown RBP13.96□□□□□ -0.17
HDAC7-228ENST00000548938 MPOP05164 745 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 GLRBP48167 497 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 NAGLUP54802 743 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 PTK2BQ14289 1009 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 ADRM1Q16186 407 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 HSDL1Q3SXM5 330 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 METTL7BQ6UX53 244 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 TRIM67Q6ZTA4 783 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 LPCAT2Q7L5N7 544 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 ERO1BQ86YB8 467 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 ZC3H15Q8WU90 426 aaKnown RBP13.96□□□□□ -0.17
HDAC7-228ENST00000548938 CENPIQ92674 756 aaPredicted RBP13.96□□□□□ -0.17
HDAC7-228ENST00000548938 MFSD3Q96ES6 412 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 HAUS8Q9BT25 410 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 PDZD7Q9H5P4 517 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 TASP1Q9H6P5 420 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 EFCAB1Q9HAE3 211 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 C20orf96Q9NUD7 363 aaPredicted RBP13.96□□□□□ -0.17
HDAC7-228ENST00000548938 ADA2Q9NZK5 511 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 COPG1Q9Y678 874 aaKnown RBP13.96□□□□□ -0.17
HDAC7-228ENST00000548938 PAPPA2Q9BXP8 1791 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 OTOFQ9HC10 1997 aa13.96□□□□□ -0.17
HDAC7-228ENST00000548938 A0A0G2JLL6 359 aaPredicted RBP13.96□□□□□ -0.18
HDAC7-228ENST00000548938 ZCWPW2A0A1B0GU75 182 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 KCNK1O00180 336 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 GAS2O43903 313 aaKnown RBP13.96□□□□□ -0.18
HDAC7-228ENST00000548938 SBK3P0C264 359 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 SAT1P21673 171 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 ARL4AP40617 200 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 KIZQ2M2Z5 673 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 LIPMQ5VYY2 423 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 PRRT2Q7Z6L0 340 aaPredicted RBP13.96□□□□□ -0.18
HDAC7-228ENST00000548938 ANKRD13AQ8IZ07 590 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 LRTOMTQ8WZ04 291 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 PCDHAC1Q9H158 963 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 SUDS3Q9H7L9 328 aaPredicted RBP13.96□□□□□ -0.18
HDAC7-228ENST00000548938 CAAP1Q9H8G2 361 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.18
HDAC7-228ENST00000548938 BPTFQ12830 3046 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 TMEM233B4DJY2 109 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 GOLGA8TH3BQL2 631 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 SLC22A2O15244 555 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 HCRTO43612 131 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 TADA2AO75478 443 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 ARIH2O95376 493 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 HNRNPCP07910 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDAC7-228ENST00000548938 ALDH3B2P48448 385 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 TXNL4AP83876 142 aaKnown RBP13.95□□□□□ -0.18
HDAC7-228ENST00000548938 IFRD2Q12894 506 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-228ENST00000548938 IKBKEQ14164 716 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 HERC3Q15034 1050 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 ZYG11AQ6WRX3 759 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 GK5Q6ZS86 529 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 ERI1Q8IV48 349 aaKnown RBP13.95□□□□□ -0.18
HDAC7-228ENST00000548938 RIN3Q8TB24 985 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 MAML3Q96JK9 1138 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 ZNF597Q96LX8 424 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 PRDM12Q9H4Q4 367 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 DPP3Q9NY33 737 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 CNOT11Q9UKZ1 510 aaKnown RBP13.95□□□□□ -0.18
HDAC7-228ENST00000548938 SLC39A10Q9ULF5 831 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 TRIM38O00635 465 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 PHGDHO43175 533 aaKnown RBP13.95□□□□□ -0.18
HDAC7-228ENST00000548938 H6PDO95479 791 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 LCP1P13796 627 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 PHKA2P46019 1235 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 CDK9P50750 372 aaKnown RBP13.95□□□□□ -0.18
HDAC7-228ENST00000548938 MPP3Q13368 585 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 RFTN1Q14699 578 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-228ENST00000548938 CARM1Q86X55 608 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 LSMEM2Q8N112 164 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 MYO1HQ8N1T3 1032 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 TMEM151AQ8N4L1 468 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 PCDH20Q8N6Y1 951 aaKnown RBP13.95□□□□□ -0.18
HDAC7-228ENST00000548938 CHST13Q8NET6 341 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 VPS39Q96JC1 886 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 VANGL2Q9ULK5 521 aa13.95□□□□□ -0.18
HDAC7-228ENST00000548938 KCNU1A8MYU2 1149 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 C9IYK1 514 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 ATP6V1G1O75348 118 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 STT3AP46977 705 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 NDST2P52849 883 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 CDH15P55291 814 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 RBP5P82980 135 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 PRKAA1Q13131 559 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 MTX3Q5HYI7 312 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms