RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CLCN5P51795 746 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 GEMIN4P57678 1058 aaKnown RBP21.52■■□□□ 1.04
CACNB3-210ENST00000548874 IL10RBQ08334 325 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 GAS6Q14393 721 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 PKN3Q6P5Z2 889 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 LINGO4Q6UY18 593 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 BZW1Q7L1Q6 419 aaKnown RBP21.52■■□□□ 1.04
CACNB3-210ENST00000548874 ZNF354CQ86Y25 554 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 SH2D3CQ8N5H7 860 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 ALLCQ8N6M5 410 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 RPLP0P6Q8NHW5 317 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 COG1Q8WTW3 980 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 P3H4Q92791 437 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 RPL10LQ96L21 214 aaKnown RBP21.52■■□□□ 1.04
CACNB3-210ENST00000548874 C16orf45Q96MC5 204 aaPredicted RBP21.52■■□□□ 1.04
CACNB3-210ENST00000548874 ZDHHC4Q9NPG8 344 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 SLCO3A1Q9UIG8 710 aa21.52■■□□□ 1.04
CACNB3-210ENST00000548874 MUC3AQ02505 3323 aa21.52■■□□□ 1.03
CACNB3-210ENST00000548874 PI15O43692 258 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 ATP9BO43861 1147 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 CEP104O60308 925 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 PEX11BO96011 259 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 SRCP12931 536 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 TCP1P17987 556 aaKnown RBP21.51■■□□□ 1.03
CACNB3-210ENST00000548874 MAGEA9P43362 315 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 SERPINH1P50454 418 aaKnown RBP21.51■■□□□ 1.03
CACNB3-210ENST00000548874 CLCN6P51797 869 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 PPIDQ08752 370 aaKnown RBP21.51■■□□□ 1.03
CACNB3-210ENST00000548874 PDK1Q15118 436 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 NOMO1Q15155 1222 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 SYT10Q6XYQ8 523 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 TRMT11Q7Z4G4 463 aaKnown RBP21.51■■□□□ 1.03
CACNB3-210ENST00000548874 ACTL9Q8TC94 416 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 FATE1Q969F0 183 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 PBXIP1Q96AQ6 731 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 HAUS1Q96CS2 278 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 GABRG3Q99928 467 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 SP110Q9HB58 689 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 CACNA2D2Q9NY47 1150 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 TTC7AQ9ULT0 858 aaPredicted RBP21.51■■□□□ 1.03
CACNB3-210ENST00000548874 ACTL7AQ9Y615 435 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 STON1Q9Y6Q2 735 aa21.51■■□□□ 1.03
CACNB3-210ENST00000548874 K7ERQ8 282 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 ADAM23O75077 832 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 KLF8O95600 359 aaPredicted RBP21.5■■□□□ 1.03
CACNB3-210ENST00000548874 DCNP07585 359 aaKnown RBP21.5■■□□□ 1.03
CACNB3-210ENST00000548874 PRKCHP24723 683 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 CCNCP24863 283 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 NTSR1P30989 418 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 ST8SIA6P61647 398 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 OTUD4Q01804 1114 aaKnown RBP21.5■■□□□ 1.03
CACNB3-210ENST00000548874 ZNF33AQ06730 810 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 FNDC3BQ53EP0 1204 aaKnown RBP21.5■■□□□ 1.03
CACNB3-210ENST00000548874 INO80DQ53TQ3 878 aaPredicted RBP21.5■■□□□ 1.03
CACNB3-210ENST00000548874 CCDC181Q5TID7 509 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 SERPINA13PQ6UXR4 307 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 CHPFQ8IZ52 775 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 TTC13Q8NBP0 860 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 TXNDC5Q8NBS9 432 aaKnown RBP21.5■■□□□ 1.03
CACNB3-210ENST00000548874 CASKIN2Q8WXE0 1202 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 ZNF599Q96NL3 588 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 IER2Q9BTL4 223 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 BRD8Q9H0E9 1235 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 C11orf16Q9NQ32 467 aa21.5■■□□□ 1.03
CACNB3-210ENST00000548874 UBA2Q9UBT2 640 aaPredicted RBP21.5■■□□□ 1.03
CACNB3-210ENST00000548874 MYO18AQ92614 2054 aaKnown RBP21.5■■□□□ 1.03
CACNB3-210ENST00000548874 WASH3PC4AMC7 463 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 SGK1O00141 431 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 PPP1R12AO14974 1030 aaPredicted RBP21.49■■□□□ 1.03
CACNB3-210ENST00000548874 SMAD6O43541 496 aaKnown RBP21.49■■□□□ 1.03
CACNB3-210ENST00000548874 FGGP02679 453 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 CASQ1P31415 396 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 NNMTP40261 264 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 XRCC4Q13426 336 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 PRKD1Q15139 912 aaPredicted RBP21.49■■□□□ 1.03
CACNB3-210ENST00000548874 SIX1Q15475 284 aaPredicted RBP21.49■■□□□ 1.03
CACNB3-210ENST00000548874 LEKR1Q6ZMV7 388 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 METTL3Q86U44 580 aaKnown RBP21.49■■□□□ 1.03
CACNB3-210ENST00000548874 ATP11CQ8NB49 1132 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 FRS2Q8WU20 508 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 MAML1Q92585 1016 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 LGMNQ99538 433 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 CEP44Q9C0F1 390 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 MMP17Q9ULZ9 603 aa21.49■■□□□ 1.03
CACNB3-210ENST00000548874 R3HDM2Q9Y2K5 976 aaKnown RBP21.49■■□□□ 1.03
CACNB3-210ENST00000548874 TTC34A8MYJ7 566 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 ATG13O75143 517 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 ZNF821O75541 412 aaPredicted RBP21.48■■□□□ 1.03
CACNB3-210ENST00000548874 TUBB4AP04350 444 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 RFTN1Q14699 578 aaPredicted RBP21.48■■□□□ 1.03
CACNB3-210ENST00000548874 DLG2Q15700 870 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 HNRNPA1L2Q32P51 320 aaKnown RBP21.48■■□□□ 1.03
CACNB3-210ENST00000548874 EOGTQ5NDL2 527 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 TMCO4Q5TGY1 634 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 TIGD7Q6NT04 549 aaPredicted RBP21.48■■□□□ 1.03
CACNB3-210ENST00000548874 MAMSTRQ6ZN01 415 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 CCDC13Q8IYE1 715 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 SPEM1Q8N4L4 309 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 FBXL6Q8N531 539 aa21.48■■□□□ 1.03
CACNB3-210ENST00000548874 CCNYQ8ND76 341 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms