RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 DCP1BQ8IZD4 617 aaKnown RBP12.95□□□□□ -0.34
SCAF11-209ENST00000547018 BLOC1S5Q8TDH9 187 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 TBC1D10AQ9BXI6 508 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 UNC93B1Q9H1C4 597 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 FAM124BQ9H5Z6 455 aaPredicted RBP12.95□□□□□ -0.34
SCAF11-209ENST00000547018 MOCS1Q9NZB8 636 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 TLK1Q9UKI8 766 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 DSEQ9UL01 958 aa12.95□□□□□ -0.34
SCAF11-209ENST00000547018 UNC5CO95185 931 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ATP6V1G2O95670 118 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 OR1E1P30953 314 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ACVRL1P37023 503 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 THOC5Q13769 683 aaKnown RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 GRM3Q14832 879 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 MAPRE1Q15691 268 aaKnown RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 FBXO48Q5FWF7 155 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ZNF470Q6ECI4 717 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 CLNKQ7Z7G1 428 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 AGAP11Q8TF27 550 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 LRRC39Q96DD0 335 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 MYEOVQ96EZ4 313 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 CLPTM1LQ96KA5 538 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 GYG2O15488 501 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 SCNN1AP37088 669 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 GP5P40197 560 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 GTF2A1P52655 376 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 SLC18A2Q05940 514 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 RASA2Q15283 850 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ZNF598Q86UK7 904 aaKnown RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ZNF276Q8N554 614 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 FBXO27Q8NI29 283 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ZNF296Q8WUU4 475 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 KCTD4Q8WVF5 259 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 IGSF8Q969P0 613 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 GORASP1Q9BQQ3 440 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 FRMD8Q9BZ67 464 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 GBA3Q9H227 469 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 TRPC7Q9HCX4 862 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 CRYL1Q9Y2S2 319 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 TLR5O60602 858 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ATXN3P54252 364 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ACCSLQ4AC99 568 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 ATG16L1Q676U5 607 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 EP400NLQ6ZTU2 488 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 COLGALT2Q8IYK4 626 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 TTC8Q8TAM2 541 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 NTAN1Q96AB6 310 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 CCDC124Q96CT7 223 aaKnown RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 VPS39Q96JC1 886 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 CATSPERBQ9H7T0 1116 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 PPCSQ9HAB8 311 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 PRDM5Q9NQX1 630 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 TXLNGQ9NUQ3 528 aa12.94□□□□□ -0.34
SCAF11-209ENST00000547018 RCOR3Q9P2K3 495 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 MTF2Q9Y483 593 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-209ENST00000547018 NEMP2A6NFY4 417 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 ENPP3O14638 875 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 HSPA4LO95757 839 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 C2P06681 752 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 ALADP13716 330 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 RPS24P62847 133 aaKnown RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 GALNT3Q14435 633 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 CCDC6Q16204 474 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 RNF43Q68DV7 783 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 GBP7Q8N8V2 638 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 ELMO2Q96JJ3 720 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 MARK4Q96L34 752 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 UPF3AQ9H1J1 476 aaKnown RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 CSNK1G1Q9HCP0 422 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 RUVBL2Q9Y230 463 aaKnown RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 B2RBV5 119 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 E9PBE3 544 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 M0QZQ0 153 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 KLHL41O60662 606 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 DNAJC8O75937 253 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 BPGMP07738 259 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 ALDH7A1P49419 539 aaKnown RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 GALNT2Q10471 571 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 CDH17Q12864 832 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 SEMA3BQ13214 749 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 PTPRRQ15256 657 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 PM20D1Q6GTS8 502 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 NAPEPLDQ6IQ20 393 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 FBXL22Q6P050 247 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 SLC9A7Q96T83 725 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 TBL1YQ9BQ87 522 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 PLCD4Q9BRC7 762 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 RGS18Q9NS28 235 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 IGSF9Q9P2J2 1179 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 GON4LQ3T8J9 2241 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 A0A0D9SEW6 157 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 T-ENOLP0DO92 83 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 SPRP35270 261 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-209ENST00000547018 MAGEA3P43357 314 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 SLC1A6P48664 564 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 SERPINB9P50453 376 aa12.93□□□□□ -0.34
SCAF11-209ENST00000547018 SLC12A2P55011 1212 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms