RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PGBD5Q8N414 524 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 RTL3Q8N8U3 475 aaKnown RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 SPPL2BQ8TCT7 592 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 APBB2Q92870 758 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 RMDN2Q96LZ7 410 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 ZNF558Q96NG5 402 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 HAPLN3Q96S86 360 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 PITPNM3Q9BZ71 974 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 VPS11Q9H270 941 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 SP110Q9HB58 689 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 PCDHA11Q9Y5I1 949 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 ARHGEF15O94989 841 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 ASMTLO95671 621 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 PRSS56P0CW18 603 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 COL6A1P12109 1028 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 MX2P20592 715 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 ATP5DP30049 168 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 GLRBP48167 497 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 IRF9Q00978 393 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 NIPAL4Q0D2K0 466 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 CBX2Q14781 532 aaPredicted RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 FAM109BQ6ICB4 259 aaPredicted RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 LRRC8BQ6P9F7 803 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 KLHL23Q8NBE8 558 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 NSMCE3Q96MG7 304 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 SRPK1Q96SB4 655 aaKnown RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 FERMT1Q9BQL6 677 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 SHCBP1LQ9BZQ2 653 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 ZYG11BQ9C0D3 744 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 OSBPL2Q9H1P3 480 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 GBA3Q9H227 469 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 CATSPERBQ9H7T0 1116 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 NPHS2Q9NP85 383 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 CPSF2Q9P2I0 782 aaKnown RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 CDH22Q9UJ99 828 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 YIPF1Q9Y548 306 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 NYNRINQ9P2P1 1898 aaKnown RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 MICAL3Q7RTP6 2002 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 A0A1W2PRU2 124 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 TPP1O14773 563 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 CCL16O15467 120 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 SNAP91O60641 907 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 TCEA3O75764 348 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 AP2A1O95782 977 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 ALDOAP04075 364 aaKnown RBP12.17□□□□□ -0.46
CCDC38-202ENST00000546386 GKP32189 559 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 ELF1P32519 619 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 GJA8P48165 433 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 ERVFC1P60507 584 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 MANEALQ5VSG8 457 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 PLPP4Q5VZY2 271 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 SLC8B1Q6J4K2 584 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 CACNA2D3Q8IZS8 1091 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 FOXP3Q9BZS1 431 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 CRISPLD2Q9H0B8 497 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 MTRRQ9UBK8 725 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 CLEC4EQ9ULY5 219 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 TRIM33Q9UPN9 1127 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 GPR39O43194 453 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 RFPL1O75677 317 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 FGF18O76093 207 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 TIMP1P01033 207 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 FDFT1P37268 417 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 RGRP47804 291 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 SARNPP82979 210 aaKnown RBP12.17□□□□□ -0.46
CCDC38-202ENST00000546386 MPP1Q00013 466 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 ZNF789Q5FWF6 425 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 BRMS1LQ5PSV4 323 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 STRA8Q7Z7C7 330 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 BANPQ8N9N5 519 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 SH3RF2Q8TEC5 729 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 CKAP2Q8WWK9 683 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 BTN2A3PQ96KV6 586 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 PPP1R36Q96LQ0 422 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 RRN3Q9NYV6 651 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 BFARQ9NZS9 450 aa12.17□□□□□ -0.46
CCDC38-202ENST00000546386 ANKRD12Q6UB98 2062 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 H7C4K7 107 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 K7ERQ8 282 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 COPEO14579 308 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 PHGDHO43175 533 aaKnown RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 TGM5O43548 720 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 RAMP2O60895 175 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 SOD2P04179 222 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 URODP06132 367 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 MBL2P11226 248 aaPredicted RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 TPSB2P20231 275 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 TACR2P21452 398 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 SCNN1BP51168 640 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 SMAD3P84022 425 aaKnown RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 MGAT5Q09328 741 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 TPSAB1Q15661 275 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 SRLQ86TD4 932 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 TMEM150AQ86TG1 271 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 PLD6Q8N2A8 252 aaKnown RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 OTUD6BQ8N6M0 293 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 WFDC5Q8TCV5 224 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 DENND1AQ8TEH3 1009 aa12.16□□□□□ -0.46
CCDC38-202ENST00000546386 PRICKLE1Q96MT3 831 aaPredicted RBP12.16□□□□□ -0.46
CCDC38-202ENST00000546386 NDNQ99608 321 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms