RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SPACA7Q96KW9 195 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 SLC39A8Q9C0K1 460 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 GOLPH3Q9H4A6 298 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 LRRC19Q9H756 370 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 DDX56Q9NY93 547 aaKnown RBP17.18■□□□□ 0.34
LTBR-215ENST00000546296 RAB23Q9ULC3 237 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 FARP1Q9Y4F1 1045 aaPredicted RBP17.18■□□□□ 0.34
LTBR-215ENST00000546296 MACROD2A1Z1Q3 448 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 SMAD6O43541 496 aaKnown RBP17.17■□□□□ 0.34
LTBR-215ENST00000546296 ZNF217O75362 1048 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 DNTTP04053 509 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 KRT1P04264 644 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 KDELR1P24390 212 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 IL4RP24394 825 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 RECQLP46063 649 aaPredicted RBP17.17■□□□□ 0.34
LTBR-215ENST00000546296 SERPINH1P50454 418 aaKnown RBP17.17■□□□□ 0.34
LTBR-215ENST00000546296 ARF5P84085 180 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 ANKRD20A8PQ5CZ79 823 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 ZNF776Q68DI1 518 aaPredicted RBP17.17■□□□□ 0.34
LTBR-215ENST00000546296 Q6ZVU0 165 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 STK40Q8N2I9 435 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 NETO2Q8NC67 525 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 KIAA1524Q8TCG1 905 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 GANCQ8TET4 914 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 PTPRN2Q92932 1015 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 CCDC114Q96M63 670 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 ZNF670Q9BS34 389 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 MAK16Q9BXY0 300 aaKnown RBP17.17■□□□□ 0.34
LTBR-215ENST00000546296 TSGA10Q9BZW7 698 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 KLC2Q9H0B6 622 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 SEMA4AQ9H3S1 761 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 ETNK2Q9NVF9 386 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 TRIM10Q9UDY6 481 aa17.17■□□□□ 0.34
LTBR-215ENST00000546296 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.17■□□□□ 0.34
LTBR-215ENST00000546296 MYO18AQ92614 2054 aaKnown RBP17.16■□□□□ 0.34
LTBR-215ENST00000546296 DCLK1O15075 740 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 PSTPIP1O43586 416 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 SERPINB6P35237 376 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 RPS14P62263 151 aaKnown RBP17.16■□□□□ 0.34
LTBR-215ENST00000546296 CCZ1BP86790 482 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 CCZ1P86791 482 aaPredicted RBP17.16■□□□□ 0.34
LTBR-215ENST00000546296 ELAVL3Q14576 367 aaKnown RBP17.16■□□□□ 0.34
LTBR-215ENST00000546296 DSG4Q86SJ6 1040 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 MMAAQ8IVH4 418 aaKnown RBP17.16■□□□□ 0.34
LTBR-215ENST00000546296 NPWQ8N729 165 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 PCDH19Q8TAB3 1148 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 OR8D1Q8WZ84 308 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 NKD2Q969F2 451 aaPredicted RBP17.16■□□□□ 0.34
LTBR-215ENST00000546296 RNF25Q96BH1 459 aaPredicted RBP17.16■□□□□ 0.34
LTBR-215ENST00000546296 CEP44Q9C0F1 390 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 RSPH9Q9H1X1 276 aaPredicted RBP17.16■□□□□ 0.34
LTBR-215ENST00000546296 TNKS2Q9H2K2 1166 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 CYP8B1Q9UNU6 501 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 FCF1Q9Y324 198 aaKnown RBP17.16■□□□□ 0.34
LTBR-215ENST00000546296 MFHAS1Q9Y4C4 1052 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 ACTL7AQ9Y615 435 aa17.16■□□□□ 0.34
LTBR-215ENST00000546296 A0A0U1RQJ8 604 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 CXorf51AA0A1B0GTR3 108 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 KRT86O43790 486 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 IL1BP01584 269 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 CCDC175P0C221 793 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 P2RY2P41231 377 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 ZBTB16Q05516 673 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 SFSWAPQ12872 951 aaKnown RBP17.15■□□□□ 0.34
LTBR-215ENST00000546296 MAP7D1Q3KQU3 841 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 AFMIDQ63HM1 303 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 C22orf39Q6P5X5 142 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 METTL3Q86U44 580 aaKnown RBP17.15■□□□□ 0.34
LTBR-215ENST00000546296 C11orf74Q86VG3 221 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 ARHGAP12Q8IWW6 846 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 RYBPQ8N488 228 aaPredicted RBP17.15■□□□□ 0.34
LTBR-215ENST00000546296 PCDH20Q8N6Y1 951 aaKnown RBP17.15■□□□□ 0.34
LTBR-215ENST00000546296 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.15■□□□□ 0.34
LTBR-215ENST00000546296 FAM129BQ96TA1 746 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 PHOX2BQ99453 314 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 SP110Q9HB58 689 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 ITM2CQ9NQX7 267 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 UBA2Q9UBT2 640 aaPredicted RBP17.15■□□□□ 0.34
LTBR-215ENST00000546296 CACNA1HO95180 2353 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 DOCK4Q8N1I0 1966 aa17.15■□□□□ 0.34
LTBR-215ENST00000546296 J3KR12 359 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 MCF2LO15068 1137 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 PRAMEF11O60813 436 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 PALMO75781 387 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 CD160O95971 181 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 PSMD8P48556 350 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 TPMTP51580 245 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 CST6Q15828 149 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 LPAL2Q16609 132 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 TTC31Q49AM3 519 aaPredicted RBP17.14■□□□□ 0.33
LTBR-215ENST00000546296 INO80DQ53TQ3 878 aaPredicted RBP17.14■□□□□ 0.33
LTBR-215ENST00000546296 CARD16Q5EG05 197 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 RFX6Q8HWS3 928 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 SYCE1Q8N0S2 351 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 RNF10Q8N5U6 811 aaKnown RBP17.14■□□□□ 0.33
LTBR-215ENST00000546296 FAM160A2Q8N612 972 aaPredicted RBP17.14■□□□□ 0.33
LTBR-215ENST00000546296 FRMD1Q8N878 549 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 CASKIN2Q8WXE0 1202 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 FAM122AQ96E09 287 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 RNF157Q96PX1 679 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms