RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 PIP4K2CQ8TBX8 421 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 FAM131CQ96AQ9 280 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 ORAI3Q9BRQ5 295 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 CNPY3Q9BT09 278 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 SPON2Q9BUD6 331 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 SLC32A1Q9H598 525 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 ATP13A1Q9HD20 1204 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 TMEM248Q9NWD8 314 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 PPM1HQ9ULR3 514 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 TPX2Q9ULW0 747 aaKnown RBP17.32■□□□□ 0.36
HOXD8-204ENST00000544999 NEU3Q9UQ49 428 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 CXorf51AA0A1B0GTR3 108 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 A0A1W2PPC4 97 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 A0A1W2PQJ5 194 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 FAM72CH0Y354 149 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 K7ERQ8 282 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 CBX4O00257 560 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 BNIP3LO60238 219 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 ZMPSTE24O75844 475 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 L1CAMP32004 1257 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 GRIA4P48058 902 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 CCR5P51681 352 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 AFF3P51826 1226 aaKnown RBP17.31■□□□□ 0.36
HOXD8-204ENST00000544999 SLC20A2Q08357 652 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 SLC14A1Q13336 389 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 MAMLD1Q13495 774 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 TEAD4Q15561 434 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 EFHC2Q5JST6 749 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 FAM72AQ5TYM5 149 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 PLEKHA7Q6IQ23 1121 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 FAM72DQ6L9T8 149 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 SCYL2Q6P3W7 929 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 C22orf39Q6P5X5 142 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 LINGO4Q6UY18 593 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 PIP4P1Q86T03 277 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 FAM72BQ86X60 149 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 DEFB124Q8NES8 71 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 OR14C36Q8NHC7 312 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 ACE2Q9BYF1 805 aaPredicted RBP17.31■□□□□ 0.36
HOXD8-204ENST00000544999 MAGEB5Q9BZ81 275 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 KDM4CQ9H3R0 1056 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 TM9SF3Q9HD45 589 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 NDFIP2Q9NV92 336 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 PARVAQ9NVD7 372 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 SARDHQ9UL12 918 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 SLCO1B1Q9Y6L6 691 aa17.31■□□□□ 0.36
HOXD8-204ENST00000544999 A0A1B0GVT2 93 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 DDX3XO00571 662 aaKnown RBP eCLIP17.3■□□□□ 0.36
HOXD8-204ENST00000544999 GIPC1O14908 333 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 SMAD6O43541 496 aaKnown RBP17.3■□□□□ 0.36
HOXD8-204ENST00000544999 CER1O95813 267 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 CSNK1EP49674 416 aaKnown RBP17.3■□□□□ 0.36
HOXD8-204ENST00000544999 SERPINH1P50454 418 aaKnown RBP17.3■□□□□ 0.36
HOXD8-204ENST00000544999 METAP1P53582 386 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 ARF5P84085 180 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 BNC1Q01954 994 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 OGDHQ02218 1023 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.3■□□□□ 0.36
HOXD8-204ENST00000544999 OR2A12Q8NGT7 310 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 ARHGEF2Q92974 986 aaKnown RBP17.3■□□□□ 0.36
HOXD8-204ENST00000544999 IQCDQ96DY2 449 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 CEP44Q9C0F1 390 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 MAGEH1Q9H213 219 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 DNAI1Q9UI46 699 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 FZD10Q9ULW2 581 aa17.3■□□□□ 0.36
HOXD8-204ENST00000544999 CNOT1A5YKK6 2376 aaKnown RBP17.3■□□□□ 0.36
HOXD8-204ENST00000544999 PLXNA2O75051 1894 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 ATMINO43313 823 aaPredicted RBP17.29■□□□□ 0.36
HOXD8-204ENST00000544999 PLRG1O43660 514 aaKnown RBP17.29■□□□□ 0.36
HOXD8-204ENST00000544999 RTN2O75298 545 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 FTLP02792 175 aaPredicted RBP17.29■□□□□ 0.36
HOXD8-204ENST00000544999 CTSLP07711 333 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 ZNF883P0CG24 379 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 SKILP12757 684 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 CD59P13987 128 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 PMLP29590 882 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 CHRNA3P32297 505 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 ACVRL1P37023 503 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 RECQLP46063 649 aaPredicted RBP17.29■□□□□ 0.36
HOXD8-204ENST00000544999 RACK1P63244 317 aaKnown RBP17.29■□□□□ 0.36
HOXD8-204ENST00000544999 ZNF252P-AS1Q0IIN9 211 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 TMC6Q7Z403 805 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 PYROXD2Q8N2H3 581 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 PCDH20Q8N6Y1 951 aaKnown RBP17.29■□□□□ 0.36
HOXD8-204ENST00000544999 TMIEQ8NEW7 156 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 SYN2Q92777 582 aaPredicted RBP17.29■□□□□ 0.36
HOXD8-204ENST00000544999 TRIM11Q96F44 468 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 GAREM1Q9H706 876 aa17.29■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3DA0A087WVF3 549 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3IA0A087WXS9 549 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3EA0A087X179 549 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3KA0A087X1G2 549 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3FA6NER0 549 aaPredicted RBP17.28■□□□□ 0.36
HOXD8-204ENST00000544999 WASH4PA8MWX3 477 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3LB9A6J9 549 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 PLK4O00444 970 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 RAMP2O60895 175 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 PRNPP04156 253 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D3HP0C7X1 549 aa17.28■□□□□ 0.36
HOXD8-204ENST00000544999 PSMA2P25787 234 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms