RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 PFKFB1P16118 471 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 LRMPQ12912 555 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 SYPL2Q5VXT5 272 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 CXorf57Q6NSI4 855 aaKnown RBP14.98□□□□□ -0.01
COPS7A-220ENST00000544725 GUSBP11Q6P575 273 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 ATG14Q6ZNE5 492 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 Q6ZSR6 202 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 PTAR1Q7Z6K3 402 aaPredicted RBP14.98□□□□□ -0.01
COPS7A-220ENST00000544725 CIR1Q86X95 450 aaPredicted RBP14.98□□□□□ -0.01
COPS7A-220ENST00000544725 EXD3Q8N9H8 876 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 ZNF548Q8NEK5 533 aaPredicted RBP14.98□□□□□ -0.01
COPS7A-220ENST00000544725 ARRDC3Q96B67 414 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 CAAP1Q9H8G2 361 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.98□□□□□ -0.01
COPS7A-220ENST00000544725 SALL4Q9UJQ4 1053 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 RCOR1Q9UKL0 485 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 PCDHB4Q9Y5E5 795 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 HS3ST3A1Q9Y663 406 aa14.98□□□□□ -0.01
COPS7A-220ENST00000544725 DOCK9Q9BZ29 2069 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 EME2A4GXA9 379 aaPredicted RBP14.97□□□□□ -0.01
COPS7A-220ENST00000544725 TERTO14746 1132 aaKnown RBP14.97□□□□□ -0.01
COPS7A-220ENST00000544725 TNFSF15O95150 251 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 PCDH8O95206 1070 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 CSF2P04141 144 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 PRR29P0C7W0 189 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 NME1P15531 152 aaKnown RBP14.97□□□□□ -0.01
COPS7A-220ENST00000544725 BRD2P25440 801 aaKnown RBP14.97□□□□□ -0.01
COPS7A-220ENST00000544725 ACADSBP45954 432 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 LURAP1LQ8IV03 231 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 SH2D3CQ8N5H7 860 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 WDR48Q8TAF3 677 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 ALG14Q96F25 216 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 PRMT1Q99873 361 aaKnown RBP14.97□□□□□ -0.01
COPS7A-220ENST00000544725 ZSWIM1Q9BR11 485 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 ARHGAP9Q9BRR9 750 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 FEM1AQ9BSK4 669 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 ST7Q9NRC1 585 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 VPS28Q9UK41 221 aa14.97□□□□□ -0.01
COPS7A-220ENST00000544725 ATXN7L1Q9ULK2 861 aaPredicted RBP14.97□□□□□ -0.01
COPS7A-220ENST00000544725 TDRD6O60522 2096 aaKnown RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 CCDC187A0A096LP49 1063 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 K7ELQ4 463 aaPredicted RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 SLC16A3O15427 465 aaKnown RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 AQP9O43315 295 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 GJB6O95452 261 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 TRUB2O95900 331 aaKnown RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 F13A1P00488 732 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 PRNPP04156 253 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 CTSLP07711 333 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 ITGA2BP08514 1039 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 ZSCAN22P10073 491 aaPredicted RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 SLC2A3P11169 496 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 CMA1P23946 247 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 CHRNA3P32297 505 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 RPIAP49247 311 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 DPYDQ12882 1025 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 FZD2Q14332 565 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 NR0B2Q15466 257 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 COLEC12Q5KU26 742 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 SEL1L3Q68CR1 1132 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 OR6B2Q6IFH4 312 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 KYAT3Q6YP21 454 aaKnown RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 ERN2Q76MJ5 926 aaKnown RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 PARGQ86W56 976 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 TMIEQ8NEW7 156 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 GLMNQ92990 594 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 RPRD1AQ96P16 312 aaPredicted RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 SRRTQ9BXP5 876 aaKnown RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 POPDC2Q9HBU9 364 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 GPR27Q9NS67 375 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 STARD5Q9NSY2 213 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 WDR70Q9NW82 654 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 IPO11Q9UI26 975 aaKnown RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 ZFR2Q9UPR6 939 aaKnown RBP14.96□□□□□ -0.01
COPS7A-220ENST00000544725 HPSEQ9Y251 543 aa14.96□□□□□ -0.01
COPS7A-220ENST00000544725 SPTY2D1-AS1A0A0U1RR47 76 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 PMS2P1A4D2B8 440 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 TPP1O14773 563 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 IGLV3-25P01717 112 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 NTRK1P04629 796 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 ITGB2P05107 769 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 SFTPCP11686 197 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 RABIFP47224 123 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 RPL34P49207 117 aaKnown RBP14.95□□□□□ -0.02
COPS7A-220ENST00000544725 INHBCP55103 352 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 LINC00303Q3SY05 128 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 TMEM259Q4ZIN3 620 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 FBXL22Q6P050 247 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 CRTC1Q6UUV9 634 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 ZNF574Q6ZN55 896 aaPredicted RBP14.95□□□□□ -0.02
COPS7A-220ENST00000544725 USP53Q70EK8 1073 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 LMX1AQ8TE12 382 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 NAT6Q93015 286 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 SGF29Q96ES7 293 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 PPP1R16AQ96I34 528 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 BMFQ96LC9 184 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 IL12RB2Q99665 862 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 HDAC8Q9BY41 377 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 HS3ST2Q9Y278 367 aa14.95□□□□□ -0.02
COPS7A-220ENST00000544725 TEX15Q9BXT5 2789 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms