RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 UPP1Q16831 310 aa16.07■□□□□ 0.16
SNRNP70-203ENST00000544278 RNF220Q5VTB9 566 aa16.07■□□□□ 0.16
SNRNP70-203ENST00000544278 NXNQ6DKJ4 435 aa16.07■□□□□ 0.16
SNRNP70-203ENST00000544278 OVOS1Q6IE37 1185 aa16.07■□□□□ 0.16
SNRNP70-203ENST00000544278 PIWIL2Q8TC59 973 aaKnown RBP16.07■□□□□ 0.16
SNRNP70-203ENST00000544278 NAT14Q8WUY8 206 aa16.07■□□□□ 0.16
SNRNP70-203ENST00000544278 SLC39A8Q9C0K1 460 aa16.07■□□□□ 0.16
SNRNP70-203ENST00000544278 COPG2Q9UBF2 871 aa16.07■□□□□ 0.16
SNRNP70-203ENST00000544278 GTF2IRD1Q9UHL9 959 aa16.07■□□□□ 0.16
SNRNP70-203ENST00000544278 OR51F1A6NGY5 319 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 ATP5HO75947 161 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 LRPAP1P30533 357 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 GLUD2P49448 558 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 SLC5A3P53794 718 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 USP10Q14694 798 aaKnown RBP16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 C1orf146Q5VVC0 180 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 MARK2Q7KZI7 788 aaKnown RBP16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 STMN2Q93045 179 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 SMARCD1Q96GM5 515 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 VPS39Q96JC1 886 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 FCRL2Q96LA5 508 aaPredicted RBP16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 EPAS1Q99814 870 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 WWP1Q9H0M0 922 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 NMRK1Q9NWW6 199 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 DNAJB4Q9UDY4 337 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 TLL2Q9Y6L7 1015 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 A0A0U1RQS6 177 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 AP2A1O95782 977 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 TSHRP16473 764 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 GABRB3P28472 473 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 RGS2P41220 211 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 NAGLUP54802 743 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 PAFAH1B3Q15102 231 aaKnown RBP16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 PDCD2Q16342 344 aaPredicted RBP16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 RIPOR1Q6ZS17 1223 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 SH3RF2Q8TEC5 729 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 EXT2Q93063 718 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 NAF1Q96HR8 494 aaKnown RBP16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 FERMT1Q9BQL6 677 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 NUF2Q9BZD4 464 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 THAP1Q9NVV9 213 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 SLC7A8Q9UHI5 535 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 CORO1CQ9ULV4 474 aaPredicted RBP16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 A0A1W2PQH9 124 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 SPECC1L-ADORA2AF8WAN1 911 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 AKR1A1P14550 325 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 OR1G1P47890 313 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 SERPINB9P50453 376 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 KCNA10Q16322 511 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 ARL13BQ3SXY8 428 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 CFAP157Q5JU67 520 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 BTBD8Q5XKL5 378 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 WDR75Q8IWA0 830 aaKnown RBP16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 B4GALNT2Q8NHY0 566 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 URGCPQ8TCY9 931 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 SMIM14Q96QK8 99 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 LRRC40Q9H9A6 602 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 SAR1AQ9NR31 198 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 AK5Q9Y6K8 562 aa16.06■□□□□ 0.16
SNRNP70-203ENST00000544278 ANKRD33BA6NCL7 494 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 GLRA3O75311 464 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 SNNO75324 88 aaPredicted RBP16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 GNAZP19086 355 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 RPL34P49207 117 aaKnown RBP16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 USP46P62068 366 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 CUL3Q13618 768 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 BLMHQ13867 455 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 SPDYAQ5MJ70 313 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 KBTBD2Q8IY47 623 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 C7orf26Q96N11 449 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 PANX3Q96QZ0 392 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 CYP2S1Q96SQ9 504 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 CHST12Q9NRB3 414 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 RBM22Q9NW64 420 aaKnown RBP eCLIP16.05■□□□□ 0.164e-8■■□□□ 12.6
SNRNP70-203ENST00000544278 KCNK4Q9NYG8 393 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 HACD1B0YJ81 288 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 CFLARO15519 480 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 ZBTB14O43829 449 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 CNTN5O94779 1100 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 CSPG5O95196 566 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 IDH3AP50213 366 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 PRKCZQ05513 592 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 TBC1D25Q3MII6 688 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 RBBP8Q99708 897 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 FRMD8Q9BZ67 464 aaPredicted RBP16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 CNGB3Q9NQW8 809 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 APOBEC2Q9Y235 224 aaKnown RBP16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 KCTD3Q9Y597 815 aa16.05■□□□□ 0.16
SNRNP70-203ENST00000544278 SIN3BO75182 1162 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 LHX1P48742 406 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 STEAP4Q687X5 459 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 RASAL3Q86YV0 1011 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 CEP97Q8IW35 865 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 ULK2Q8IYT8 1036 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 MTBPQ96DY7 904 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 GATA5Q9BWX5 397 aaPredicted RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 COG4Q9H9E3 785 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 PPM1HQ9ULR3 514 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms