RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 IFNKQ9P0W0 207 aa23.8■■□□□ 1.4
CHFR-222ENST00000544093 PPM1HQ9ULR3 514 aa23.8■■□□□ 1.4
CHFR-222ENST00000544093 HPCAL4Q9UM19 191 aa23.8■■□□□ 1.4
CHFR-222ENST00000544093 CAPN11Q9UMQ6 739 aa23.8■■□□□ 1.4
CHFR-222ENST00000544093 NCOR2Q9Y618 2525 aa23.8■■□□□ 1.4
CHFR-222ENST00000544093 ASCC3Q8N3C0 2202 aaKnown RBP23.79■■□□□ 1.4
CHFR-222ENST00000544093 MED19A0JLT2 244 aaPredicted RBP23.79■■□□□ 1.4
CHFR-222ENST00000544093 UPK3BL1B0FP48 263 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 EIF3CLB5ME19 914 aaKnown RBP23.79■■□□□ 1.4
CHFR-222ENST00000544093 UPK3BL2E5RIL1 263 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 DDX3XO00571 662 aaKnown RBP eCLIP23.79■■□□□ 1.4
CHFR-222ENST00000544093 CSRP1P21291 193 aaKnown RBP23.79■■□□□ 1.4
CHFR-222ENST00000544093 RECQLP46063 649 aaPredicted RBP23.79■■□□□ 1.4
CHFR-222ENST00000544093 GALCP54803 685 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 TEAD4Q15561 434 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 UAP1L1Q3KQV9 507 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 TDRD12Q587J7 1177 aaKnown RBP23.79■■□□□ 1.4
CHFR-222ENST00000544093 MINDY1Q8N5J2 469 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 AADATQ8N5Z0 425 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 OR7D4Q8NG98 312 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 C1orf216Q8TAB5 229 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 EIF3CQ99613 913 aaKnown RBP23.79■■□□□ 1.4
CHFR-222ENST00000544093 ACE2Q9BYF1 805 aaPredicted RBP23.79■■□□□ 1.4
CHFR-222ENST00000544093 SERGEFQ9UGK8 458 aa23.79■■□□□ 1.4
CHFR-222ENST00000544093 LUC7L2Q9Y383 392 aaKnown RBP23.79■■□□□ 1.4
CHFR-222ENST00000544093 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.79■■□□□ 1.4
CHFR-222ENST00000544093 FSBPO95073 299 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 MT-CO1P00395 513 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 SERPING1P05155 500 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 PSMA2P25787 234 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 SERPINH1P50454 418 aaKnown RBP23.78■■□□□ 1.4
CHFR-222ENST00000544093 SLC14A1Q13336 389 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 FAM131CQ96AQ9 280 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 ISCUQ9H1K1 167 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 CATSPERBQ9H7T0 1116 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 DNAAF2Q9NVR5 837 aaKnown RBP23.78■■□□□ 1.4
CHFR-222ENST00000544093 CNOT8Q9UFF9 292 aaKnown RBP23.78■■□□□ 1.4
CHFR-222ENST00000544093 FZD10Q9ULW2 581 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 NEU3Q9UQ49 428 aa23.78■■□□□ 1.4
CHFR-222ENST00000544093 FAM47DPA6NHR8 397 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 FAM72CH0Y354 149 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 FGF10O15520 208 aaPredicted RBP23.77■■□□□ 1.4
CHFR-222ENST00000544093 CBFA2T2O43439 604 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 RAMP2O60895 175 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 RNF8O76064 485 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 KCNK5O95279 499 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 PRNPP04156 253 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 ADRB1P08588 477 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 SKILP12757 684 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 EPHB2P29323 1055 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 CCR5P51681 352 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 ADPRHP54922 357 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 GRIK2Q13002 908 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 FAM72AQ5TYM5 149 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 FAM72DQ6L9T8 149 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 C22orf39Q6P5X5 142 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 NCEH1Q6PIU2 408 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 FAM72BQ86X60 149 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 PCDH20Q8N6Y1 951 aaKnown RBP23.77■■□□□ 1.4
CHFR-222ENST00000544093 TMIEQ8NEW7 156 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 OR14C36Q8NHC7 312 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 PIP4K2CQ8TBX8 421 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 ZNF653Q96CK0 615 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 SLC32A1Q9H598 525 aa23.77■■□□□ 1.4
CHFR-222ENST00000544093 TMEM191CA6NGB0 347 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 ZSCAN5CA6NGD5 496 aaPredicted RBP23.76■■□□□ 1.39
CHFR-222ENST00000544093 ZMPSTE24O75844 475 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 CER1O95813 267 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 CEACAM1P13688 526 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 DRD3P35462 400 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 NUDT1P36639 197 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 GRIA4P48058 902 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 POLD3Q15054 466 aaPredicted RBP23.76■■□□□ 1.39
CHFR-222ENST00000544093 HGSNATQ68CP4 663 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 LINGO4Q6UY18 593 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 RTL3Q8N8U3 475 aaKnown RBP23.76■■□□□ 1.39
CHFR-222ENST00000544093 OR2A12Q8NGT7 310 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 ARHGEF2Q92974 986 aaKnown RBP23.76■■□□□ 1.39
CHFR-222ENST00000544093 TSPY26PQ9H489 355 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 DNAI1Q9UI46 699 aa23.76■■□□□ 1.39
CHFR-222ENST00000544093 A0A1W2PPC4 97 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 ATMINO43313 823 aaPredicted RBP23.75■■□□□ 1.39
CHFR-222ENST00000544093 BNIP3LO60238 219 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 IGHV4-34P06331 123 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 CHRNA3P32297 505 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 NOVA1P51513 510 aaKnown RBP23.75■■□□□ 1.39
CHFR-222ENST00000544093 YBEYP58557 167 aaPredicted RBP23.75■■□□□ 1.39
CHFR-222ENST00000544093 ARF5P84085 180 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 OGDHQ02218 1023 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 SEMA3BQ13214 749 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 ACAP1Q15027 740 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.75■■□□□ 1.39
CHFR-222ENST00000544093 PSTKQ8IV42 348 aaKnown RBP23.75■■□□□ 1.39
CHFR-222ENST00000544093 CPLX3Q8WVH0 158 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 ISG20Q96AZ6 181 aaKnown RBP23.75■■□□□ 1.39
CHFR-222ENST00000544093 SKA1Q96BD8 255 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 PPP1R16AQ96I34 528 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.75■■□□□ 1.39
CHFR-222ENST00000544093 FSCN3Q9NQT6 498 aa23.75■■□□□ 1.39
CHFR-222ENST00000544093 DYRK4Q9NR20 520 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms