RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ERP27Q96DN0 273 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 ZNF419Q96HQ0 510 aaPredicted RBP17.37■□□□□ 0.37
PTPRO-209ENST00000543886 RBBP8Q99708 897 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 FICDQ9BVA6 458 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 FSD1LQ9BXM9 530 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 PPP1R12CQ9BZL4 782 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 MYLK2Q9H1R3 596 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 TMEM248Q9NWD8 314 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 DCTN4Q9UJW0 460 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 CDY1Q9Y6F8 540 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 CCDC195A0A1B0GUA6 201 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 CFAP73A6NFT4 308 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 C2CD2LO14523 706 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 BIRC5O15392 142 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 PARNO95453 639 aaKnown RBP17.36■□□□□ 0.37
PTPRO-209ENST00000543886 TYK2P29597 1187 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 NCALDP61601 193 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 PDE1CQ14123 709 aaPredicted RBP17.36■□□□□ 0.37
PTPRO-209ENST00000543886 CHI3L2Q15782 390 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 HSP90AA5PQ58FG0 334 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 RAP1GAP2Q684P5 730 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 NLRP9Q7RTR0 991 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 DEFB128Q7Z7B8 93 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 RAB3IL1Q8TBN0 382 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 GIPC2Q8TF65 315 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 NOL6Q9H6R4 1146 aaKnown RBP17.36■□□□□ 0.37
PTPRO-209ENST00000543886 SIRPGQ9P1W8 387 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 DCDC2Q9UHG0 476 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 CHKBQ9Y259 395 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 GREB1Q4ZG55 1949 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 SLC38A8A6NNN8 435 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 TGDSO95455 350 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 CXCL10P02778 98 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 NMBRP28336 390 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 ALDH7A1P49419 539 aaKnown RBP17.36■□□□□ 0.37
PTPRO-209ENST00000543886 SERPINB8P50452 374 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 ACBD5Q5T8D3 534 aaPredicted RBP17.36■□□□□ 0.37
PTPRO-209ENST00000543886 TEDDM1Q5T9Z0 273 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 CCDC91Q7Z6B0 441 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 ZNF354CQ86Y25 554 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 RFWD2Q8NHY2 731 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 HMCESQ96FZ2 354 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 AGAP2Q99490 1192 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 KIFC1Q9BW19 673 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 ENTPD7Q9NQZ7 604 aa17.36■□□□□ 0.37
PTPRO-209ENST00000543886 IGLV3-10A0A075B6K4 115 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 A0A0G2JND7 137 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 PMPCBO75439 489 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 UPP2O95045 317 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 TOP3BO95985 862 aaKnown RBP17.35■□□□□ 0.37
PTPRO-209ENST00000543886 BPGMP07738 259 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 RENBPP51606 427 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 MNAT1P51948 309 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 KPNA1P52294 538 aaPredicted RBP17.35■□□□□ 0.37
PTPRO-209ENST00000543886 LIMK2P53671 638 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 ALFQ53S48 1182 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 PCID2Q5JVF3 399 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 N4BP2L1Q5TBK1 243 aaPredicted RBP17.35■□□□□ 0.37
PTPRO-209ENST00000543886 PDPK2PQ6A1A2 396 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 ANKLE1Q8NAG6 615 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 PPHLN1Q8NEY8 458 aaKnown RBP17.35■□□□□ 0.37
PTPRO-209ENST00000543886 FBXO22Q8NEZ5 403 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 ATXN7L3BQ96GX2 97 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 RNF208Q9H0X6 261 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 SP110Q9HB58 689 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 IARS2Q9NSE4 1012 aaKnown RBP17.35■□□□□ 0.37
PTPRO-209ENST00000543886 TXLNGQ9NUQ3 528 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 OGDHLQ9ULD0 1010 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 TLR5O60602 858 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 RASSF9O75901 435 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 CNTN5O94779 1100 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 IGLV3-27P01718 113 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 IRX4P78413 519 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 RING1Q06587 406 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 BST1Q10588 318 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 MTA1Q13330 715 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 MPP3Q13368 585 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 DBN1Q16643 649 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 FBXL22Q6P050 247 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 PKN3Q6P5Z2 889 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 DCLK2Q8N568 766 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 RPRD1AQ96P16 312 aaPredicted RBP17.35■□□□□ 0.37
PTPRO-209ENST00000543886 CCSER2Q9H7U1 834 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 SNX15Q9NRS6 342 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 NSMCE4AQ9NXX6 385 aa17.35■□□□□ 0.37
PTPRO-209ENST00000543886 DOCK4Q8N1I0 1966 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 CCDC78A2IDD5 438 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 TIMM44O43615 452 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 ATF6P18850 670 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 SKIV2L2P42285 1042 aaKnown RBP17.34■□□□□ 0.37
PTPRO-209ENST00000543886 CSE1LP55060 971 aaKnown RBP17.34■□□□□ 0.37
PTPRO-209ENST00000543886 HNRNPDQ14103 355 aaKnown RBP17.34■□□□□ 0.37
PTPRO-209ENST00000543886 POU6F1Q14863 301 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 INSCQ1MX18 579 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 USP41Q3LFD5 358 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 ANKRD33Q7Z3H0 272 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 PPP1R14CQ8TAE6 165 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 NSMCE1Q8WV22 266 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 FATE1Q969F0 183 aa17.34■□□□□ 0.37
PTPRO-209ENST00000543886 IGSF8Q969P0 613 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms