RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 PCDHGA5Q9Y5G8 931 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 RASA4BC9J798 803 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 RASA4O43374 803 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 GFRA3O60609 400 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 NOP2P46087 812 aaKnown RBP18.26■□□□□ 0.51
TSFM-208ENST00000543727 TPMTP51580 245 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 VAV2P52735 878 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 CDH6P55285 790 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 RPS14P62263 151 aaKnown RBP18.26■□□□□ 0.51
TSFM-208ENST00000543727 SERINC3Q13530 473 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 PLK5Q496M5 336 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 INO80DQ53TQ3 878 aaPredicted RBP18.26■□□□□ 0.51
TSFM-208ENST00000543727 AFMIDQ63HM1 303 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 PMS2CLQ68D20 193 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 C11orf63Q6NUN7 778 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 C22orf39Q6P5X5 142 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 TMCO3Q6UWJ1 677 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 RAD9BQ6WBX8 426 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 LPCAT2Q7L5N7 544 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 FAM160A2Q8N612 972 aaPredicted RBP18.26■□□□□ 0.51
TSFM-208ENST00000543727 RUBCNQ92622 972 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 CSPG4P5Q96PW8 444 aa18.26■□□□□ 0.51
TSFM-208ENST00000543727 IGHV1OR15-9A0A0B4J2B8 117 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 MCF2LO15068 1137 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 PJA2O43164 708 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 MAP3K13O43283 966 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 NRDCO43847 1150 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 RETP07949 1114 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 C5AR1P21730 350 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 ACVRL1P37023 503 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 RECQLP46063 649 aaPredicted RBP18.25■□□□□ 0.51
TSFM-208ENST00000543727 MRE11P49959 708 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 ARSEP51690 589 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 SRSF5Q13243 272 aaKnown RBP18.25■□□□□ 0.51
TSFM-208ENST00000543727 CST6Q15828 149 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 FAM46CQ5VWP2 391 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 TXNRD3NBQ6F5E7 133 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 LRRC49Q8IUZ0 686 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 GPR161Q8N6U8 529 aaKnown RBP18.25■□□□□ 0.51
TSFM-208ENST00000543727 DUSP15Q9H1R2 295 aaPredicted RBP18.25■□□□□ 0.51
TSFM-208ENST00000543727 FZD4Q9ULV1 537 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 ABCA7Q8IZY2 2146 aa18.25■□□□□ 0.51
TSFM-208ENST00000543727 C1QTNF3-AMACRE9PGA6 284 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 DCLK1O15075 740 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 PSTPIP1O43586 416 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 FOXD2O60548 495 aaPredicted RBP18.24■□□□□ 0.51
TSFM-208ENST00000543727 MT-CO1P00395 513 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 GLDCP23378 1020 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 CD6P30203 668 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 CCDC15Q0P6D6 951 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 DPYSL3Q14195 570 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 IFI16Q16666 785 aaKnown RBP18.24■□□□□ 0.51
TSFM-208ENST00000543727 TMCO4Q5TGY1 634 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 Q6ZVU0 165 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 ASCL5Q7RTU5 278 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 KIAA1328Q86T90 577 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 ZNF354CQ86Y25 554 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 RHOT1Q8IXI2 618 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 KCTD6Q8NC69 237 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 FAF2Q96CS3 445 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 HMCESQ96FZ2 354 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 FAM129BQ96TA1 746 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 KLC2Q9H0B6 622 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 PABPC3Q9H361 631 aaKnown RBP18.24■□□□□ 0.51
TSFM-208ENST00000543727 SGK2Q9HBY8 427 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 DDX56Q9NY93 547 aaKnown RBP18.24■□□□□ 0.51
TSFM-208ENST00000543727 NCDNQ9UBB6 729 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 TPX2Q9ULW0 747 aaKnown RBP18.24■□□□□ 0.51
TSFM-208ENST00000543727 CYP8B1Q9UNU6 501 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 NCKAP1Q9Y2A7 1128 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 OTOGLQ3ZCN5 2332 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 SHROOM3Q8TF72 1996 aa18.24■□□□□ 0.51
TSFM-208ENST00000543727 TMEM110-MUSTN1A8MSY1 372 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 ARHGAP6O43182 974 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 SPOPO43791 374 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 NDUFS2O75306 463 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 EPN2O95208 641 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 GSRP00390 522 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 PRNPP04156 253 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 HOXD12P35452 270 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 TAS2R40P59535 323 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 RPL6Q02878 288 aaKnown RBP18.23■□□□□ 0.51
TSFM-208ENST00000543727 RFTN1Q14699 578 aaPredicted RBP18.23■□□□□ 0.51
TSFM-208ENST00000543727 LINGO4Q6UY18 593 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 MMAAQ8IVH4 418 aaKnown RBP18.23■□□□□ 0.51
TSFM-208ENST00000543727 STK40Q8N2I9 435 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 TMIEQ8NEW7 156 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 CADM4Q8NFZ8 388 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 OR2A12Q8NGT7 310 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 RLN3Q8WXF3 142 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 FOXJ1Q92949 421 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 LRIG1Q96JA1 1093 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 CALN1Q9BXU9 219 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 SLC6A17Q9H1V8 727 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 WSB2Q9NYS7 404 aaPredicted RBP18.23■□□□□ 0.51
TSFM-208ENST00000543727 MBD1Q9UIS9 605 aaPredicted RBP18.23■□□□□ 0.51
TSFM-208ENST00000543727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
TSFM-208ENST00000543727 REXO2Q9Y3B8 237 aaKnown RBP18.23■□□□□ 0.51
TSFM-208ENST00000543727 PIEZO1Q92508 2521 aa18.23■□□□□ 0.51
TSFM-208ENST00000543727 SLC7A4O43246 635 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms