RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-222ENST00000543695 URGCPQ8TCY9 931 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 CLP1Q92989 425 aaKnown RBP11.48□□□□□ -0.57
LDHA-222ENST00000543695 RNF34Q969K3 372 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 ZNF689Q96CS4 500 aaPredicted RBP11.48□□□□□ -0.57
LDHA-222ENST00000543695 TBC1D31Q96DN5 1066 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 TEKT5Q96M29 485 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 NECAB3Q96P71 396 aaPredicted RBP11.48□□□□□ -0.57
LDHA-222ENST00000543695 TMEM209Q96SK2 561 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 TRIM56Q9BRZ2 755 aaKnown RBP11.48□□□□□ -0.57
LDHA-222ENST00000543695 MLPHQ9BV36 600 aaPredicted RBP11.48□□□□□ -0.57
LDHA-222ENST00000543695 CEP41Q9BYV8 373 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 ALG13Q9NP73 1137 aaKnown RBP11.48□□□□□ -0.57
LDHA-222ENST00000543695 FNIP2Q9P278 1114 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 DCDC2Q9UHG0 476 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 LNPEPQ9UIQ6 1025 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 LRFN2Q9ULH4 789 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 NEU3Q9UQ49 428 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 MUC3AQ02505 3323 aa11.48□□□□□ -0.57
LDHA-222ENST00000543695 FAM237BA0A1B0GVD1 139 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 HAX1O00165 279 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 TRAFD1O14545 582 aaPredicted RBP11.47□□□□□ -0.57
LDHA-222ENST00000543695 SRGAP2BP0DMP2 458 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 NFKB1P19838 968 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 KCNA5P22460 613 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 MAGEA12P43365 314 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 MNAT1P51948 309 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 SLC5A3P53794 718 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 CSE1LP55060 971 aaKnown RBP11.47□□□□□ -0.57
LDHA-222ENST00000543695 FAM189BP81408 668 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 OCRLQ01968 901 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 YWHAHQ04917 246 aaPredicted RBP11.47□□□□□ -0.57
LDHA-222ENST00000543695 DSC1Q08554 894 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 ZBTB17Q13105 803 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 PAN2Q504Q3 1202 aaKnown RBP11.47□□□□□ -0.57
LDHA-222ENST00000543695 SWT1Q5T5J6 900 aaKnown RBP11.47□□□□□ -0.57
LDHA-222ENST00000543695 MROH9Q5TGP6 573 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 ARMC3Q5W041 872 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 ICE2Q659A1 982 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 NAPEPLDQ6IQ20 393 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 MSANTD2Q6P1R3 559 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 SLC24A5Q71RS6 500 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 LINC00523Q86TU6 105 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 TMEM135Q86UB9 458 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 NUDCD3Q8IVD9 361 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.47□□□□□ -0.571e-6■■■■□ 20.5
LDHA-222ENST00000543695 ATP2A3Q93084 1043 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 SKA1Q96BD8 255 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 ZNF669Q96BR6 464 aaPredicted RBP11.47□□□□□ -0.57
LDHA-222ENST00000543695 FUBP3Q96I24 572 aaKnown RBP eCLIP11.47□□□□□ -0.57
LDHA-222ENST00000543695 SIKE1Q9BRV8 207 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 TMEM120AQ9BXJ8 343 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 SLC13A1Q9BZW2 595 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 IL22Q9GZX6 179 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 ZCWPW1Q9H0M4 648 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 LMAN2LQ9H0V9 348 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 NSUN3Q9H649 340 aaKnown RBP11.47□□□□□ -0.57
LDHA-222ENST00000543695 CATSPERBQ9H7T0 1116 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 KCNK13Q9HB14 408 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 NOD2Q9HC29 1040 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 KCNK4Q9NYG8 393 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 ZFATQ9P243 1243 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 VANGL2Q9ULK5 521 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 SOX13Q9UN79 622 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 RPL26L1Q9UNX3 145 aaKnown RBP11.47□□□□□ -0.57
LDHA-222ENST00000543695 PCDHB7Q9Y5E2 793 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 SNX10Q9Y5X0 201 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 RPS6KL1Q9Y6S9 549 aa11.47□□□□□ -0.57
LDHA-222ENST00000543695 ARHGAP42A6NI28 874 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 WASH4PA8MWX3 477 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 TPP1O14773 563 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 SNNO75324 88 aaPredicted RBP11.46□□□□□ -0.57
LDHA-222ENST00000543695 HAUS5O94927 633 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 OAZ2O95190 189 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 ITGA2BP08514 1039 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 KRT16P08779 473 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 DLDP09622 509 aaKnown RBP11.46□□□□□ -0.57
LDHA-222ENST00000543695 T-ENOLP0DO92 83 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 PTPN4P29074 926 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 CCR1P32246 355 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 SPRP35270 261 aaPredicted RBP11.46□□□□□ -0.57
LDHA-222ENST00000543695 GRIK1P39086 918 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 SERPINB8P50452 374 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 CRADDP78560 199 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 TMPRSS15P98073 1019 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 BST1Q10588 318 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 CDH17Q12864 832 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 OVGP1Q12889 678 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 KRT72Q14CN4 511 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 CHI3L2Q15782 390 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 PUS10Q3MIT2 529 aaKnown RBP11.46□□□□□ -0.57
LDHA-222ENST00000543695 LEXMQ3ZCV2 418 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 ANKRD20A4Q4UJ75 823 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 TAF1BQ53T94 588 aaPredicted RBP11.46□□□□□ -0.57
LDHA-222ENST00000543695 NOMO2Q5JPE7 1267 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 CLNKQ7Z7G1 428 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 SCD5Q86SK9 330 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 LRRC49Q8IUZ0 686 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 CCDC117Q8IWD4 279 aaPredicted RBP11.46□□□□□ -0.57
LDHA-222ENST00000543695 COLGALT2Q8IYK4 626 aa11.46□□□□□ -0.57
LDHA-222ENST00000543695 CMTR2Q8IYT2 770 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms