RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 DCAF4L2Q8NA75 395 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 BBOF1Q8ND07 529 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 USP33Q8TEY7 942 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 CASKIN2Q8WXE0 1202 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 IFT81Q8WYA0 676 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 SEC14L1Q92503 715 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 MAML1Q92585 1016 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 ALG14Q96F25 216 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 ZNF599Q96NL3 588 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 AGAP3Q96P47 875 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 IL12RB2Q99665 862 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 RPP25Q9BUL9 199 aaKnown RBP10.89□□□□□ -0.67
DDB1-221ENST00000543162 C2orf49Q9BVC5 232 aaPredicted RBP10.89□□□□□ -0.67
DDB1-221ENST00000543162 PARD6BQ9BYG5 372 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 PDFQ9HBH1 243 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 HPS4Q9NQG7 708 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 GDF3Q9NR23 364 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 FAM114A2Q9NRY5 505 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 DNAJC17Q9NVM6 304 aaKnown RBP10.89□□□□□ -0.67
DDB1-221ENST00000543162 RBM22Q9NW64 420 aaKnown RBP eCLIP10.89□□□□□ -0.674e-7■■■■■ 38
DDB1-221ENST00000543162 UBA2Q9UBT2 640 aaPredicted RBP10.89□□□□□ -0.67
DDB1-221ENST00000543162 GGA2Q9UJY4 613 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 FAM50BQ9Y247 325 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 OTOL1A6NHN0 477 aaPredicted RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 NDC80O14777 642 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 ZBTB24O43167 697 aaPredicted RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 SNAP91O60641 907 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 PEX11BO96011 259 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 PABPC1P11940 636 aaKnown RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 ITIH2P19823 946 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 GLDCP23378 1020 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 IVDP26440 423 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 HLA-FP30511 346 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 MMP13P45452 471 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 BASP1P80723 227 aaKnown RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 HLTFQ14527 1009 aaKnown RBP eCLIP10.88□□□□□ -0.67
DDB1-221ENST00000543162 DMC1Q14565 340 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 LBRQ14739 615 aaKnown RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 TRADDQ15628 312 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 SMAD2Q15796 467 aaKnown RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 PLEKHG6Q3KR16 790 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 ITPRIPL2Q3MIP1 535 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 PUS10Q3MIT2 529 aaKnown RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 PITRM1Q5JRX3 1037 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 FAM182AQ5T1J6 154 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 IZUMO3Q5VZ72 239 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 ITPRIPL1Q6GPH6 555 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 PTCRAQ6ISU1 281 aaPredicted RBP10.88□□□□□ -0.67
DDB1-221ENST00000543162 RETSATQ6NUM9 610 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 WDR93Q6P2C0 686 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 APCDD1Q8J025 514 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 BBS5Q8N3I7 341 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 ACDQ96AP0 544 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 LMLNQ96KR4 655 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 TEKT5Q96M29 485 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 BRD9Q9H8M2 597 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 HAUS2Q9NVX0 235 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 WHRNQ9P202 907 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 LIMD1Q9UGP4 676 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 RSPH14Q9UHP6 348 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 VPS51Q9UID3 782 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 ANAPC5Q9UJX4 755 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 FBXO10Q9UK96 956 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 TTLL3Q9Y4R7 772 aa10.88□□□□□ -0.67
DDB1-221ENST00000543162 DNALI1O14645 258 aaPredicted RBP10.87□□□□□ -0.67
DDB1-221ENST00000543162 TULP3O75386 442 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 ZMPSTE24O75844 475 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 SEC31AO94979 1220 aaKnown RBP10.87□□□□□ -0.67
DDB1-221ENST00000543162 METTL18O95568 372 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 TNFRSF8P28908 595 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 FDFT1P37268 417 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 CARSP49589 748 aaKnown RBP10.87□□□□□ -0.67
DDB1-221ENST00000543162 DGKGP49619 791 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 ITGA8P53708 1063 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 VSNL1P62760 191 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 ARF5P84085 180 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 SLC10A7Q0GE19 358 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 ZNF235Q14590 738 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 RFTN1Q14699 578 aaPredicted RBP10.87□□□□□ -0.67
DDB1-221ENST00000543162 AAK1Q2M2I8 961 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 PARP6Q2NL67 630 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 GAB4Q2WGN9 574 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 FUT11Q495W5 492 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 FAXCQ5TGI0 409 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 GRAMD4Q6IC98 578 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 LINGO4Q6UY18 593 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 CCNI2Q6ZMN8 369 aaPredicted RBP10.87□□□□□ -0.67
DDB1-221ENST00000543162 PCGF5Q86SE9 256 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 C12orf40Q86WS4 652 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 ETFBKMTQ8IXQ9 262 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 PPIL6Q8IXY8 311 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 AHI1Q8N157 1196 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 TEX26Q8N6G2 289 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 CNTD1Q8N815 330 aa10.87□□□□□ -0.67
DDB1-221ENST00000543162 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.87□□□□□ -0.673e-7■□□□□ 9.3
DDB1-221ENST00000543162 EIF1ADQ8N9N8 165 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms