RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 ARRDC3Q96B67 414 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 EVI5LQ96CN4 794 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 HDHD5Q9BXW7 423 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 ARHGAP39Q9C0H5 1083 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 MYLK2Q9H1R3 596 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 AAMDCQ9H7C9 122 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 SEMA4BQ9NPR2 832 aaPredicted RBP4.4□□□□□ -1.71
MDM2-229ENST00000543046 TMLHEQ9NVH6 421 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 FBXO4Q9UKT5 387 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 COG5Q9UP83 839 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 PKP3Q9Y446 797 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 CECR2Q9BXF3 1484 aa4.4□□□□□ -1.71
MDM2-229ENST00000543046 FMN1Q68DA7 1419 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 KCNJ18B7U540 433 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 E7EVH7 732 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 MSI1O43347 362 aaKnown RBP4.39□□□□□ -1.71
MDM2-229ENST00000543046 FAM155BO75949 473 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 KRT38O76015 456 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 BMP15O95972 392 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 MBD3O95983 291 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 PRPH2P23942 346 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 TPM4P67936 248 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 CUL4BQ13620 913 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 TWIST1Q15672 202 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 INPP5JQ15735 1006 aaPredicted RBP4.39□□□□□ -1.71
MDM2-229ENST00000543046 SMAD1Q15797 465 aaKnown RBP4.39□□□□□ -1.71
MDM2-229ENST00000543046 LRRC24Q50LG9 513 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 LRCH2Q5VUJ6 765 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 ANO1Q5XXA6 986 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 B4GALNT4Q76KP1 1039 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 ANKS1BQ7Z6G8 1248 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 TMEM200AQ86VY9 491 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 KLBQ86Z14 1044 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 MMP21Q8N119 569 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 PTGR2Q8N8N7 351 aaPredicted RBP4.39□□□□□ -1.71
MDM2-229ENST00000543046 GPATCH11Q8N954 259 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 FAM110DQ8TAY7 271 aaPredicted RBP4.39□□□□□ -1.71
MDM2-229ENST00000543046 PPM1EQ8WY54 764 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 MSI2Q96DH6 328 aaKnown RBP4.39□□□□□ -1.71
MDM2-229ENST00000543046 PAIP2Q9BPZ3 127 aaKnown RBP4.39□□□□□ -1.71
MDM2-229ENST00000543046 WDR83Q9BRX9 315 aaKnown RBP4.39□□□□□ -1.71
MDM2-229ENST00000543046 IL21RQ9HBE5 538 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 G6PC2Q9NQR9 355 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 POT1Q9NUX5 634 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 POLKQ9UBT6 870 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 PCDHA12Q9UN75 941 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 DTX4Q9Y2E6 619 aa4.39□□□□□ -1.71
MDM2-229ENST00000543046 KIF27Q86VH2 1401 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 NPIPB13A6NJU9 1138 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 NPIPB5A8MRT5 1133 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 FOXO6A8MYZ6 492 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 NPIPB4C9JG80 1138 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 CTAGE5O15320 804 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 HTATSF1O43719 755 aaKnown RBP4.38□□□□□ -1.71
MDM2-229ENST00000543046 TULP3O75386 442 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 RPS6KA5O75582 802 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 NEURL1O76050 574 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 NDUFB8O95169 186 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 TFRCP02786 760 aaKnown RBP4.38□□□□□ -1.71
MDM2-229ENST00000543046 CHN1P15882 459 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 HOXB9P17482 250 aaPredicted RBP4.38□□□□□ -1.71
MDM2-229ENST00000543046 ADD2P35612 726 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 STAT1P42224 750 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 RBM5P52756 815 aaKnown RBP eCLIP4.38□□□□□ -1.71
MDM2-229ENST00000543046 RHAGQ02094 409 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 ZBTB16Q05516 673 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 RAPGEF1Q13905 1077 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 TTC31Q49AM3 519 aaPredicted RBP4.38□□□□□ -1.71
MDM2-229ENST00000543046 TTC39AQ5SRH9 613 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 MANEAQ5SRI9 462 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 C6orf10Q5SRN2 563 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 MTFR2Q6P444 385 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 SLC30A9Q6PML9 568 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 COLCA1Q6ZS62 124 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 NKAPQ8N5F7 415 aaKnown RBP4.38□□□□□ -1.71
MDM2-229ENST00000543046 FSIP1Q8NA03 581 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 GOLGA5Q8TBA6 731 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 THAP4Q8WY91 577 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 KCNJ9Q92806 393 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 VCPIP1Q96JH7 1222 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 FAM167BQ9BTA0 163 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 TEX13AQ9BXU3 409 aaPredicted RBP4.38□□□□□ -1.71
MDM2-229ENST00000543046 CLPBQ9H078 707 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 RWDD1Q9H446 243 aaPredicted RBP4.38□□□□□ -1.71
MDM2-229ENST00000543046 SPAG4Q9NPE6 437 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 SLC22A11Q9NSA0 550 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 ZBTB40Q9NUA8 1239 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 DECR2Q9NUI1 292 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 ZNF446Q9NWS9 450 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 ARL15Q9NXU5 204 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 KIF17Q9P2E2 1029 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 SLC25A13Q9UJS0 675 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 PTPN23Q9H3S7 1636 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 PARD3Q8TEW0 1356 aa4.38□□□□□ -1.71
MDM2-229ENST00000543046 CLASP1Q7Z460 1538 aa4.37□□□□□ -1.71
MDM2-229ENST00000543046 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
MDM2-229ENST00000543046 A6NNC1 897 aa4.37□□□□□ -1.71
MDM2-229ENST00000543046 ATG13O75143 517 aa4.37□□□□□ -1.71
MDM2-229ENST00000543046 EPN2O95208 641 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms