RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 MYCBPAPQ8TBZ2 947 aa9.03□□□□□ -0.96
MRPS35-204ENST00000542199 PPP2R3CQ969Q6 453 aa9.03□□□□□ -0.96
MRPS35-204ENST00000542199 INPP4AQ96PE3 977 aaPredicted RBP9.03□□□□□ -0.96
MRPS35-204ENST00000542199 LZTS2Q9BRK4 669 aa9.03□□□□□ -0.96
MRPS35-204ENST00000542199 KATNAL1Q9BW62 490 aa9.03□□□□□ -0.96
MRPS35-204ENST00000542199 KRTAP9-9Q9BYP9 154 aa9.03□□□□□ -0.96
MRPS35-204ENST00000542199 KRTAP9-4Q9BYQ2 154 aa9.03□□□□□ -0.96
MRPS35-204ENST00000542199 SERHL2Q9H4I8 314 aa9.03□□□□□ -0.96
MRPS35-204ENST00000542199 TESQ9UGI8 421 aaKnown RBP9.03□□□□□ -0.96
MRPS35-204ENST00000542199 CEP83Q9Y592 693 aa9.03□□□□□ -0.96
MRPS35-204ENST00000542199 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.03□□□□□ -0.96
MRPS35-204ENST00000542199 FAM234BA2RU67 622 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 MEIS2O14770 477 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 AREL1O15033 823 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 PPM1DO15297 605 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 SRGAP2O75044 1071 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 STAM2O75886 525 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 PIAS2O75928 621 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 GGPS1O95749 300 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 ZNF286BP0CG31 522 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 EGR2P11161 476 aaPredicted RBP9.02□□□□□ -0.97
MRPS35-204ENST00000542199 ACTN1P12814 892 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 MYL4P12829 197 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 HOXC8P31273 242 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 ICAM3P32942 547 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 BUD31P41223 144 aaPredicted RBP9.02□□□□□ -0.97
MRPS35-204ENST00000542199 ICE2Q659A1 982 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 CENPQQ7L2Z9 268 aaPredicted RBP9.02□□□□□ -0.97
MRPS35-204ENST00000542199 SLC15A3Q8IY34 581 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 TMTC2Q8N394 836 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 SRBD1Q8N5C6 995 aaKnown RBP9.02□□□□□ -0.97
MRPS35-204ENST00000542199 USP38Q8NB14 1042 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 B3GALNT2Q8NCR0 500 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 AFAP1L1Q8TED9 768 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 RRP36Q96EU6 259 aaKnown RBP9.02□□□□□ -0.97
MRPS35-204ENST00000542199 SPATA33Q96N06 139 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 ZNF747Q9BV97 191 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 SLC28A3Q9HAS3 691 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 HEYLQ9NQ87 328 aaPredicted RBP9.02□□□□□ -0.97
MRPS35-204ENST00000542199 TBCCD1Q9NVR7 557 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 HDAC6Q9UBN7 1215 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 DKK4Q9UBT3 224 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 PRRC2BQ5JSZ5 2229 aaKnown RBP9.02□□□□□ -0.97
MRPS35-204ENST00000542199 TET1Q8NFU7 2136 aa9.02□□□□□ -0.97
MRPS35-204ENST00000542199 BAIAP3O94812 1187 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 PLEKHA8P1O95397 391 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 CXCL10P02778 98 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 CALM1P0DP23 149 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 CALM2P0DP24 149 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 CALM3P0DP25 149 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 MYOGP15173 224 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 GNAQP50148 359 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 EIF2B5Q13144 721 aaKnown RBP9.01□□□□□ -0.97
MRPS35-204ENST00000542199 E2F2Q14209 437 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 TRIM71Q2Q1W2 868 aaKnown RBP9.01□□□□□ -0.97
MRPS35-204ENST00000542199 ZNF750Q32MQ0 723 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 USP17L6PQ6QN14 398 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 CRTC1Q6UUV9 634 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 PHOSPHO2Q8TCD6 241 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 PIBF1Q8WXW3 757 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 ATG4AQ8WYN0 398 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 Q96MF0 132 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 C16orf70Q9BSU1 422 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 CASS4Q9NQ75 786 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 SEC63Q9UGP8 760 aaKnown RBP9.01□□□□□ -0.97
MRPS35-204ENST00000542199 LRCH1Q9Y2L9 728 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 NCANO14594 1321 aa9.01□□□□□ -0.97
MRPS35-204ENST00000542199 MYH6P13533 1939 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 KIAA1217Q5T5P2 1943 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 A0A087WV62 115 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 CCDC69A6NI79 296 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 NPIPB8E9PQR5 432 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 PRRG2O14669 202 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 NBNO60934 754 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 INSRRP14616 1297 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 RXRAP19793 462 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 GABRB3P28472 473 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 NEDD9Q14511 834 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 TUBB8Q3ZCM7 444 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 LY6G5CQ5SRR4 150 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 DEPDC1Q5TB30 811 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 SFRP4Q6FHJ7 346 aaPredicted RBP9□□□□□ -0.97
MRPS35-204ENST00000542199 METTL7BQ6UX53 244 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 TMTC3Q6ZXV5 915 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 LRRC8DQ7L1W4 858 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 SERINC5Q86VE9 423 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 SYTL1Q8IYJ3 562 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 LNX2Q8N448 690 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 GLIS1Q8NBF1 620 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 TOR1AIP2Q8NFQ8 470 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 SENP7Q9BQF6 1050 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 TTLL2Q9BWV7 592 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 LRRC2Q9BYS8 371 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 MAGEB5Q9BZ81 275 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 FTOQ9C0B1 505 aaKnown RBP eCLIP9□□□□□ -0.97
MRPS35-204ENST00000542199 MLXIPQ9HAP2 919 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 CAPN11Q9UMQ6 739 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 SNX14Q9Y5W7 946 aa9□□□□□ -0.97
MRPS35-204ENST00000542199 TRIOO75962 3097 aa8.99□□□□□ -0.97
MRPS35-204ENST00000542199 PIPSLA2A3N6 862 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms