RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CD207Q9UJ71 328 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 EXOC7Q9UPT5 735 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 HES2Q9Y543 173 aa5.79□□□□□ -1.48
CPSF7-220ENST00000541963 PRRC2BQ5JSZ5 2229 aaKnown RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 DBX1A6NMT0 343 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 H3BQ06 376 aaPredicted RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 K7ENM7 598 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 FOXN3O00409 490 aaPredicted RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 PER2O15055 1255 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 KIAA0391O15091 583 aaKnown RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 TPD52L2O43399 206 aaKnown RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 TRAPPC3O43617 180 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 RECQL4O94761 1208 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 URODP06132 367 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 HOXB8P17481 243 aaPredicted RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 GAP43P17677 238 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 BMP7P18075 431 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 PTMSP20962 102 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 FPR1P21462 350 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 KLRC2P26717 231 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 CFPP27918 469 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 SLC7A1P30825 629 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 PBX3P40426 434 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 ALDH1A3P47895 512 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 ME1P48163 572 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 KCNJ5P48544 419 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 PIK3CGP48736 1102 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 LIG4P49917 911 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 RAP2BP61225 183 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 HHEXQ03014 270 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 DSC1Q08554 894 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 ELAVL2Q12926 359 aaKnown RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 COASYQ13057 564 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 MAPK7Q13164 816 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 POSTNQ15063 836 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 USP41Q3LFD5 358 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 CES5AQ6NT32 575 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 ZNF529Q6P280 563 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 PDXDC1Q6P996 788 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 DCLRE1AQ6PJP8 1040 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 TMEM184AQ6ZMB5 413 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 STXBP4Q6ZWJ1 553 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 MTERF4Q7Z6M4 381 aaKnown RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 ADGRD2Q7Z7M1 963 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 CCDC65Q8IXS2 484 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 GPR65Q8IYL9 337 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 DAW1Q8N136 415 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 TMEM161BQ8NDZ6 487 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 ZFP28Q8NHY6 868 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 HVCN1Q96D96 273 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 TMEM176AQ96HP8 235 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 ZNF512Q96ME7 567 aaPredicted RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 UROC1Q96N76 676 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 TSPAN18Q96SJ8 248 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 CPPED1Q9BRF8 314 aaPredicted RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 REEP2Q9BRK0 252 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 PANK2Q9BZ23 570 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 ENKD1Q9H0I2 346 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 ZBP1Q9H171 429 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 PLEKHA5Q9HAU0 1116 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 PTPRHQ9HD43 1115 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 BLOC1S4Q9NUP1 217 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 MIOSQ9NXC5 875 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 CFAP97Q9P2B7 532 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 SEL1LQ9UBV2 794 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 DNAJB4Q9UDY4 337 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 TBX20Q9UMR3 447 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 GDAQ9Y2T3 454 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 PRG3Q9Y2Y8 225 aaPredicted RBP5.78□□□□□ -1.48
CPSF7-220ENST00000541963 SNX13Q9Y5W8 968 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 MYH11P35749 1972 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 KIAA1671Q9BY89 1806 aa5.78□□□□□ -1.48
CPSF7-220ENST00000541963 COL6A3P12111 3177 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 RHPN2P1A8MT19 583 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 HIDE1A8MVS5 230 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 CXorf49A8MYA2 514 aaPredicted RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 F2RL2O00254 374 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 MATN2O00339 956 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 HNRNPDLO14979 420 aaKnown RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 MBTPS2O43462 519 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 FRS3O43559 492 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 IPO13O94829 963 aaKnown RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 C1RP00736 705 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 TPM2P07951 284 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 CLTAP09496 248 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 INHBBP09529 407 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 HARSP12081 509 aaKnown RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 MYF5P13349 255 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 IDEP14735 1019 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 RPL9P32969 192 aaKnown RBP5.77□□□□□ -1.49
CPSF7-220ENST00000541963 GLUD2P49448 558 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ZNF131P52739 623 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 TERF1P54274 439 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 OSTNP61366 133 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 MXRA7P84157 204 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 GTF2BQ00403 316 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ITIH3Q06033 890 aa5.77□□□□□ -1.49
CPSF7-220ENST00000541963 ALCAMQ13740 583 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms