RNA–Protein interactions for RNA: ENST00000540957.1

FERMT3-204, Transcript of fermitin family member 3, humanhuman

TSL 5

Gene FERMT3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-204ENST00000540957 CCDC114Q96M63 670 aa21.75■■□□□ 1.07
FERMT3-204ENST00000540957 SLC39A8Q9C0K1 460 aa21.75■■□□□ 1.07
FERMT3-204ENST00000540957 SLC6A17Q9H1V8 727 aa21.75■■□□□ 1.07
FERMT3-204ENST00000540957 GRID2IPA4D2P6 1211 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 K7ERQ8 282 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 RNASEH1O60930 286 aaKnown RBP21.74■■□□□ 1.07
FERMT3-204ENST00000540957 PAPOLAP51003 745 aaKnown RBP21.74■■□□□ 1.07
FERMT3-204ENST00000540957 COPAP53621 1224 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 ELAVL3Q14576 367 aaKnown RBP21.74■■□□□ 1.07
FERMT3-204ENST00000540957 USP39Q53GS9 565 aaKnown RBP21.74■■□□□ 1.07
FERMT3-204ENST00000540957 C9orf64Q5T6V5 341 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 AFMIDQ63HM1 303 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 C22orf39Q6P5X5 142 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 Q6ZVU0 165 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.74■■□□□ 1.07
FERMT3-204ENST00000540957 SIPA1Q96FS4 1042 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 SPACA7Q96KW9 195 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 CEP44Q9C0F1 390 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 MKRN2Q9H000 416 aaKnown RBP21.74■■□□□ 1.07
FERMT3-204ENST00000540957 KLC2Q9H0B6 622 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 ETNK2Q9NVF9 386 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 MFHAS1Q9Y4C4 1052 aa21.74■■□□□ 1.07
FERMT3-204ENST00000540957 BNIP3LO60238 219 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 PALMO75781 387 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 RPP40O75818 363 aaKnown RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 ACADMP11310 421 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 VAV1P15498 845 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 BYSLQ13895 437 aaKnown RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 ZNF776Q68DI1 518 aaPredicted RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 LEKR1Q6ZMV7 388 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 METTL3Q86U44 580 aaKnown RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 VSIG1Q86XK7 387 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 ARHGAP12Q8IWW6 846 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 RNF10Q8N5U6 811 aaKnown RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 LRRC57Q8N9N7 239 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 NETO2Q8NC67 525 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 PCDH19Q8TAB3 1148 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 PTPRN2Q92932 1015 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 RNF25Q96BH1 459 aaPredicted RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 FAF2Q96CS3 445 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 MAK16Q9BXY0 300 aaKnown RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 RSPH9Q9H1X1 276 aaPredicted RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 SP110Q9HB58 689 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 GUCA1BQ9UMX6 200 aa21.73■■□□□ 1.07
FERMT3-204ENST00000540957 FCF1Q9Y324 198 aaKnown RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 FARP1Q9Y4F1 1045 aaPredicted RBP21.73■■□□□ 1.07
FERMT3-204ENST00000540957 ZNF487B1APH4 448 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 SMAD6O43541 496 aaKnown RBP21.72■■□□□ 1.07
FERMT3-204ENST00000540957 LILRB5O75023 590 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 ZNF217O75362 1048 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 RECQLP46063 649 aaPredicted RBP21.72■■□□□ 1.07
FERMT3-204ENST00000540957 SRSF5Q13243 272 aaKnown RBP21.72■■□□□ 1.07
FERMT3-204ENST00000540957 CEP68Q76N32 757 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 DSG4Q86SJ6 1040 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 KATNAL2Q8IYT4 538 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 STK40Q8N2I9 435 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 PCDH20Q8N6Y1 951 aaKnown RBP21.72■■□□□ 1.07
FERMT3-204ENST00000540957 GAB3Q8WWW8 586 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 CASKIN2Q8WXE0 1202 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 OR8D1Q8WZ84 308 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 LZTFL1Q9NQ48 299 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 UBA2Q9UBT2 640 aaPredicted RBP21.72■■□□□ 1.07
FERMT3-204ENST00000540957 ACTL7AQ9Y615 435 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 MUC6Q6W4X9 2439 aa21.72■■□□□ 1.07
FERMT3-204ENST00000540957 CCDC66A2RUB6 948 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 C3orf70A6NLC5 250 aaPredicted RBP21.71■■□□□ 1.07
FERMT3-204ENST00000540957 PRAMEF11O60813 436 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 DNTTP04053 509 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 CTNNA1P35221 906 aaKnown RBP21.71■■□□□ 1.07
FERMT3-204ENST00000540957 NBL1P41271 181 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 DNA2P51530 1060 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 RPS14P62263 151 aaKnown RBP21.71■■□□□ 1.07
FERMT3-204ENST00000540957 NHLH1Q02575 133 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 ZBTB16Q05516 673 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 NCBP2-AS2Q69YL0 99 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 PEX26Q7Z412 305 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 CCDC50Q8IVM0 306 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 ATPAF2Q8N5M1 289 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 KRT35Q92764 455 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 RNF157Q96PX1 679 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 TNKS2Q9H2K2 1166 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 AMFRQ9UKV5 643 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 PPP2R2CQ9Y2T4 447 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 CAPN6Q9Y6Q1 641 aa21.71■■□□□ 1.07
FERMT3-204ENST00000540957 J3KR12 359 aa21.7■■□□□ 1.06
FERMT3-204ENST00000540957 HRO43593 1189 aa21.7■■□□□ 1.06
FERMT3-204ENST00000540957 MFSD11O43934 449 aa21.7■■□□□ 1.06
FERMT3-204ENST00000540957 ZRANB2O95218 330 aaKnown RBP eCLIP21.7■■□□□ 1.06
FERMT3-204ENST00000540957 CD160O95971 181 aa21.7■■□□□ 1.06
FERMT3-204ENST00000540957 PSMD8P48556 350 aa21.7■■□□□ 1.06
FERMT3-204ENST00000540957 MARCKSL1P49006 195 aa21.7■■□□□ 1.06
FERMT3-204ENST00000540957 SIM2Q14190 667 aaPredicted RBP21.7■■□□□ 1.06
FERMT3-204ENST00000540957 PAFAH1B3Q15102 231 aaKnown RBP21.7■■□□□ 1.06
FERMT3-204ENST00000540957 TTC31Q49AM3 519 aaPredicted RBP21.7■■□□□ 1.06
FERMT3-204ENST00000540957 INO80DQ53TQ3 878 aaPredicted RBP21.7■■□□□ 1.06
FERMT3-204ENST00000540957 C11orf74Q86VG3 221 aa21.7■■□□□ 1.06
FERMT3-204ENST00000540957 RFX6Q8HWS3 928 aa21.7■■□□□ 1.06
FERMT3-204ENST00000540957 MMAAQ8IVH4 418 aaKnown RBP21.7■■□□□ 1.06
FERMT3-204ENST00000540957 RCOR2Q8IZ40 523 aa21.7■■□□□ 1.06
FERMT3-204ENST00000540957 PQLC3Q8N755 202 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms