RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 CCNI2Q6ZMN8 369 aaPredicted RBP13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 Q6ZVU0 165 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 STRADAQ7RTN6 431 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 IQCHQ86VS3 1027 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 MFSD2AQ8NA29 543 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 PIP4K2CQ8TBX8 421 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 RHBDD1Q8TEB9 315 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 SKA1Q96BD8 255 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 PCDHB18PQ96TA0 734 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 ELF4Q99607 663 aaPredicted RBP13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 ZYG11BQ9C0D3 744 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 MUC3BQ9H195 1237 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 OSBPL2Q9H1P3 480 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 FAM207AQ9NSI2 230 aaPredicted RBP13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 ZMIZ1Q9ULJ6 1067 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 DMTF1Q9Y222 760 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 BTBD3Q9Y2F9 522 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 NBEAQ8NFP9 2946 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 TRPM6Q9BX84 2022 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 CELSR3Q9NYQ7 3312 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 LGALS16A8MUM7 142 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 C1QTNF3-AMACRE9PGA6 284 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 GOLGA8SH3BPF8 625 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 KCNK3O14649 394 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 SMAD6O43541 496 aaKnown RBP13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 SNAP91O60641 907 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 TPM2P07951 284 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 OR1E1P30953 314 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 ADRA1BP35368 520 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 NUMBP49757 651 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 PPP2CBP62714 309 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 PPP2CAP67775 309 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 MYL5Q02045 173 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 CNTN1Q12860 1018 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 OVGP1Q12889 678 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 SYCP1Q15431 976 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 PIP5KL1Q5T9C9 394 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 TMPRSS7Q7RTY8 843 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 PRPF39Q86UA1 669 aaKnown RBP13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 PHF13Q86YI8 300 aaPredicted RBP13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 PLPP6Q8IY26 295 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 EMC1Q8N766 993 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 SAP25Q8TEE9 199 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 RXFP2Q8WXD0 754 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 CEP44Q9C0F1 390 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 PREBQ9HCU5 417 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 NLRC4Q9NPP4 1024 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 METTL5Q9NRN9 209 aaKnown RBP13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 MPP6Q9NZW5 540 aa13.42□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3DA0A087WVF3 549 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3IA0A087WXS9 549 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3EA0A087X179 549 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3KA0A087X1G2 549 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TCRBV5S1A1TA0A578 114 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3FA6NER0 549 aaPredicted RBP13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3LB9A6J9 549 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 K7ERQ8 282 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TLR4O00206 839 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 YKT6O15498 198 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TNFSF14O43557 240 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 RNGTTO60942 597 aaKnown RBP13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 RTN2O75298 545 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 CD160O95971 181 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3HP0C7X1 549 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 CHRNA3P32297 505 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 C21orf59P57076 290 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 NXPH1P58417 271 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 STX1AQ16623 288 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 CLEC16AQ2KHT3 1053 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3GQ6DHY5 549 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3CQ6IPX1 549 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 NAPEPLDQ6IQ20 393 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 SASS6Q6UVJ0 657 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 KANSL1Q7Z3B3 1105 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 ADAT2Q7Z6V5 191 aaKnown RBP13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 NLRP14Q86W24 1093 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 FAM131BQ86XD5 332 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 TBC1D3Q8IZP1 549 aaPredicted RBP13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 PNPLA1Q8N8W4 532 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 ATP11CQ8NB49 1132 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 NTAN1Q96AB6 310 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 SERAC1Q96JX3 654 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 CCDC114Q96M63 670 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 HDAC8Q9BY41 377 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 NEU3Q9UQ49 428 aa13.41□□□□□ -0.26
SEMA4D-223ENST00000540475 ANKRD11Q6UB99 2663 aaPredicted RBP13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 SIGLEC16A6NMB1 481 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 RNF103O00237 685 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 PLK4O00444 970 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 SRGAP2O75044 1071 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 PRNPP04156 253 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 ATXN1LP0C7T5 689 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 GLDCP23378 1020 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 RRM1P23921 792 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 SDC4P31431 198 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 SERPINH1P50454 418 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 HDAC4P56524 1084 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 ARF5P84085 180 aa13.4□□□□□ -0.26
SEMA4D-223ENST00000540475 ATP11AP98196 1134 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms