RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 THEGLP0DJG4 465 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 HNRNPA2B1P22626 353 aaKnown RBP12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 GLDCP23378 1020 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 AKT2P31751 481 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 KRT9P35527 623 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 SCNN1AP37088 669 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 CXCR3P49682 368 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 INSM1Q01101 510 aaPredicted RBP12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 KCNMA1Q12791 1236 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 POM121L1PQ3SYA9 428 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 PTPN20Q4JDL3 420 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 C14orf80Q86SX3 495 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 HORMAD1Q86X24 394 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 PASD1Q8IV76 773 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 ZNF683Q8IZ20 524 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 ATP11CQ8NB49 1132 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 LSM14AQ8ND56 463 aaKnown RBP12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 OR4C6Q8NH72 309 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 FGF11Q92914 225 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 NT5C3BQ969T7 300 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 PSMB7Q99436 277 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 HDAC8Q9BY41 377 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 WDCPQ9H6R7 721 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 SYNCQ9H7C4 482 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 DYRK4Q9NR20 520 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 PIGVQ9NUD9 493 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 VPS51Q9UID3 782 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 DRGXA6NNA5 263 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 KPNA3O00505 521 aaPredicted RBP12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 TRIM38O00635 465 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 SLC31A1O15431 190 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 SIGLEC6O43699 453 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 BNIP3LO60238 219 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 SDC3O75056 442 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 CNTN5O94779 1100 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 MT-CO1P00395 513 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 DGKAP23743 735 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 PON1P27169 355 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 ITPKBP27987 946 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 ACTN2P35609 894 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 GGCXP38435 758 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 BPIFB4P59827 614 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 DAB2P98082 770 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 ZNF284Q2VY69 593 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 OTUD1Q5VV17 481 aaPredicted RBP12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 LRRC31Q6UY01 552 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 ERN2Q76MJ5 926 aaKnown RBP12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 ABI3BPQ7Z7G0 1075 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 ZSCAN30Q86W11 494 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 SLC25A45Q8N413 288 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 PPP1R16AQ96I34 528 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 C1orf74Q96LT6 269 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 TKTL2Q9H0I9 626 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 SIK2Q9H0K1 926 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 CA5BQ9Y2D0 317 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 IGSF10Q6WRI0 2623 aa12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 NYNRINQ9P2P1 1898 aaKnown RBP12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 TP53BP1Q12888 1972 aaPredicted RBP12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 SMG1Q96Q15 3661 aaKnown RBP12.29□□□□□ -0.44
CBX3P4-202ENST00000540428 ASXL3Q9C0F0 2248 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 IGLV3-10A0A075B6K4 115 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 CXorf51AA0A1B0GTR3 108 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 I6L893 689 aaPredicted RBP12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 ATXN7O15265 892 aaPredicted RBP12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 BRINP1O60477 761 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 SNAP91O60641 907 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 PIAS2O75928 621 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 ADCY5O95622 1261 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 MT-CO3P00414 261 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 ALPPL2P10696 532 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 CKMT1AP12532 417 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 PRLRP16471 622 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 CDH5P33151 784 aaPredicted RBP12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 CLCN1P35523 988 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 RECQLP46063 649 aaPredicted RBP12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 APBA1Q02410 837 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 SLC20A2Q08357 652 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 TBC1D25Q3MII6 688 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 ALFQ53S48 1182 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 C22orf39Q6P5X5 142 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 ZNF783Q6ZMS7 281 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 DCP2Q8IU60 420 aaKnown RBP12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 CREBRFQ8IUR6 639 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 TMEM35BQ8NCS4 154 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 ARRDC3Q96B67 414 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 CEP44Q9C0F1 390 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 USP29Q9HBJ7 922 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 SIX2Q9NPC8 291 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 ANLNQ9NQW6 1124 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 EVA1BQ9NVM1 165 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 IL36AQ9UHA7 158 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 DNAJC12Q9UKB3 198 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 HS3ST3A1Q9Y663 406 aa12.28□□□□□ -0.44
CBX3P4-202ENST00000540428 A0A0D9SEW6 157 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 ILVBLA1L0T0 632 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 NEMP2A6NFY4 417 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 A6NNZ2 444 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 K7ERQ8 282 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms