RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 OSGEPQ9NPF4 335 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 ABCB8Q9NUT2 735 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 HAUS2Q9NVX0 235 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 SPATA6Q9NWH7 488 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 DDX56Q9NY93 547 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 PPARGC1AQ9UBK2 798 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 EGFL7Q9UHF1 273 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 SLC25A13Q9UJS0 675 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 GGA2Q9UJY4 613 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 VPS28Q9UK41 221 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 FZD10Q9ULW2 581 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 SLC27A6Q9Y2P4 619 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 ATG2AQ2TAZ0 1938 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 MACROD2A1Z1Q3 448 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 GOLGA6L9A6NEM1 432 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 DRGXA6NNA5 263 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 BTNL10A8MVZ5 291 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 M0R082 166 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 LAMTOR5O43504 91 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 BUB1O43683 1085 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 RAMP2O60895 175 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 LILRB5O75023 590 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 NEBLO76041 1014 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 MTA2O94776 668 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 ASLP04424 464 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 DCNP07585 359 aaKnown RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 PABPC1P11940 636 aaKnown RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 PCSK2P16519 638 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 HOXD9P28356 352 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 SERPINB6P35237 376 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 SOX18P35713 384 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 OPRD1P41143 372 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 CXCL12P48061 93 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 SLC6A11P48066 632 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 HCAR3P49019 387 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 MAPKAPK2P49137 400 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 CCR3P51677 355 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 HADHBP55084 474 aaKnown RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 CDH6P55285 790 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 GPLD1P80108 840 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 OGDHQ02218 1023 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 NRG1Q02297 640 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 PLAURQ03405 335 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 POLD3Q15054 466 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 TCEAL1Q15170 157 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 ACCSLQ4AC99 568 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 FNDC3BQ53EP0 1204 aaKnown RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 KCNT1Q5JUK3 1230 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 CCDC181Q5TID7 509 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 LRRC38Q5VT99 294 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 NADSYN1Q6IA69 706 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 TRNP1Q6NT89 227 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 RETSATQ6NUM9 610 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 TMCO3Q6UWJ1 677 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 SERPINA13PQ6UXR4 307 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 ZNF783Q6ZMS7 281 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 BZW1Q7L1Q6 419 aaKnown RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 PEX26Q7Z412 305 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 BNIPLQ7Z465 357 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 POLNQ7Z5Q5 900 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 TFAP2DQ7Z6R9 452 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 CCDC50Q8IVM0 306 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 LZTR1Q8N653 840 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 CCDC185Q8N715 623 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 UBL4BQ8N7F7 174 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 ZNF513Q8N8E2 541 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 ACRBPQ8NEB7 543 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 ZNF417Q8TAU3 575 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 NSMCE1Q8WV22 266 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 TTC9Q92623 222 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 CCDC114Q96M63 670 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 ZNF587Q96SQ5 575 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 PRMT1Q99873 361 aaKnown RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 FERMT1Q9BQL6 677 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 DESI2Q9BSY9 194 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 SPON2Q9BUD6 331 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 FOXQ1Q9C009 403 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 ELOVL2Q9NXB9 296 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 FRRS1LQ9P0K9 344 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 SUN2Q9UH99 717 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 XPO7Q9UIA9 1087 aaKnown RBP6.64□□□□□ -1.35
SNHG1-212ENST00000539975 AMFRQ9UKV5 643 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 NENFQ9UMX5 172 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 GUCA1BQ9UMX6 200 aa6.64□□□□□ -1.35
SNHG1-212ENST00000539975 A0A0A0MRY4 1105 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 ILVBLA1L0T0 632 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 CCDC66A2RUB6 948 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 LRRD1A4D1F6 860 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 FAM86C2PA6NEL3 165 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 ZSCAN5CA6NGD5 496 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-212ENST00000539975 ARHGAP42A6NI28 874 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 MIF4GDA9UHW6 222 aaKnown RBP6.63□□□□□ -1.35
SNHG1-212ENST00000539975 CBX4O00257 560 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 GFRA2O00451 464 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 PJA2O43164 708 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 BUB1BO60566 1050 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-212ENST00000539975 RNASEH1O60930 286 aaKnown RBP6.63□□□□□ -1.35
SNHG1-212ENST00000539975 LRIG2O94898 1065 aa6.63□□□□□ -1.35
SNHG1-212ENST00000539975 ZRANB2O95218 330 aaKnown RBP eCLIP6.63□□□□□ -1.352e-9■■■■■ 30
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms