RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 AVILO75366 819 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 ARHGEF15O94989 841 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 CA3P07451 260 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 POU2F2P09086 479 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 HNRNPA1P09651 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
COPS3-212ENST00000539941 MYOGP15173 224 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 DDX6P26196 483 aaKnown RBP eCLIP17.21■□□□□ 0.35
COPS3-212ENST00000539941 RENBPP51606 427 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 TNK2Q07912 1038 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 IL10RBQ08334 325 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 KLHL38Q2WGJ6 581 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 KCTD11Q693B1 232 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 RFWD3Q6PCD5 774 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 C3orf62Q6ZUJ4 267 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 CCNJLQ8IV13 435 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 HS6ST3Q8IZP7 471 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 SH2D3CQ8N5H7 860 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 ARFGAP2Q8N6H7 521 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 LEMD2Q8NC56 503 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 NSMCE1Q8WV22 266 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 SIGLEC10Q96LC7 697 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 GUCD1Q96NT3 240 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 GORASP1Q9BQQ3 440 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 MAGEH1Q9H213 219 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 ACSS3Q9H6R3 686 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 LRRC40Q9H9A6 602 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 SP110Q9HB58 689 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 MAN1C1Q9NR34 630 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 SLC24A2Q9UI40 661 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 NOVA2Q9UNW9 492 aaKnown RBP17.21■□□□□ 0.35
COPS3-212ENST00000539941 ZNF510Q9Y2H8 683 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 ZFP37Q9Y6Q3 630 aaPredicted RBP17.21■□□□□ 0.35
COPS3-212ENST00000539941 CHD5Q8TDI0 1954 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 TRAV19A0A0A6YYK7 116 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 A0A1B0GVM2 712 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 TCAF2A6NFQ2 919 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 H3BNC9 293 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 CCL16O15467 120 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 CLASP2O75122 1294 aaKnown RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 ANXA9O76027 345 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 IRF1P10914 325 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 NR1D1P20393 614 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 SSTR1P30872 391 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 CYP4F8P98187 520 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 SERINC3Q13530 473 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 ELMSAN1Q6PJG2 1045 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 KDM7AQ6ZMT4 941 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 Q6ZNB5 142 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 CIR1Q86X95 450 aaPredicted RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 IGDCC3Q8IVU1 814 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 MYEOVQ96EZ4 313 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 PRICKLE1Q96MT3 831 aaPredicted RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 FAM161BQ96MY7 647 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 SLC22A12Q96S37 553 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 CYP2S1Q96SQ9 504 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 EBNA1BP2Q99848 306 aaKnown RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 CORO1BQ9BR76 489 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 NAT9Q9BTE0 207 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 TTYH1Q9H313 450 aaPredicted RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 ATXN3LQ9H3M9 355 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 GLOD4Q9HC38 313 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 SMPD4Q9NXE4 827 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 ZC3H7BQ9UGR2 993 aaKnown RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 RABGEF1Q9UJ41 708 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 LSM7Q9UK45 103 aaKnown RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 CPQQ9Y646 472 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 SDR42E2A6NKP2 422 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 SMIM23A6NLE4 172 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 GRXCR1A8MXD5 290 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 GREM1O60565 184 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 NEBLO76041 1014 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 PEX11BO96011 259 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 MYL4P12829 197 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 EZRP15311 586 aaKnown RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 PTPN2P17706 415 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 STX2P32856 288 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 IRS1P35568 1242 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 SLCO1A2P46721 670 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 GNGT1P63211 74 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 GPM6BQ13491 265 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 EP400NLQ6ZTU2 488 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 SETD3Q86TU7 594 aaPredicted RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 FAM217AQ8IXS0 508 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 AGGF1Q8N302 714 aaeCLIP17.2■□□□□ 0.34
COPS3-212ENST00000539941 ADAMTS19Q8TE59 1207 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 SLC22A17Q8WUG5 538 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 N4BP2L2Q92802 583 aaPredicted RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 ZNF599Q96NL3 588 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 MLPHQ9BV36 600 aaPredicted RBP17.2■□□□□ 0.34
COPS3-212ENST00000539941 RBM22Q9NW64 420 aaKnown RBP eCLIP17.2■□□□□ 0.34
COPS3-212ENST00000539941 EURLQ9NYK6 297 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 GBF1Q92538 1859 aa17.2■□□□□ 0.34
COPS3-212ENST00000539941 ILVBLA1L0T0 632 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 F5H423 210 aaPredicted RBP17.19■□□□□ 0.34
COPS3-212ENST00000539941 TRDMT1O14717 391 aaKnown RBP17.19■□□□□ 0.34
COPS3-212ENST00000539941 XYLBO75191 536 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 CKMP06732 381 aa17.19■□□□□ 0.34
COPS3-212ENST00000539941 SLC8A1P32418 973 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms