RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 RCN3Q96D15 328 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 MFSD3Q96ES6 412 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 SLC9A7Q96T83 725 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 GPR22Q99680 433 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 BRD8Q9H0E9 1235 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 SNX25Q9H3E2 840 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 WDR41Q9HAD4 459 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 C20orf96Q9NUD7 363 aaPredicted RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 NSMCE4AQ9NXX6 385 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 ZDHHC2Q9UIJ5 367 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 TLK1Q9UKI8 766 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 TRHDEQ9UKU6 1024 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 SLC39A10Q9ULF5 831 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 PADI4Q9UM07 663 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 PHF24Q9UPV7 400 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 GNEQ9Y223 722 aaKnown RBP9.84□□□□□ -0.83
CDH13-204ENST00000539548 PAPPA2Q9BXP8 1791 aa9.84□□□□□ -0.83
CDH13-204ENST00000539548 PDCD11Q14690 1871 aaKnown RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 M0QYT0 321 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 PIRO00625 290 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 ACOT8O14734 319 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 ZBTB24O43167 697 aaPredicted RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 MTSS1O43312 755 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 DDHD2O94830 711 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 SPATA31D3P0C874 917 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 SRGAP2BP0DMP2 458 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 COL6A2P12110 1019 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 HOXA11P31270 313 aaPredicted RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 ABCG1P45844 678 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 HCAR3P49019 387 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 MYBPC1Q00872 1141 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 PPIDQ08752 370 aaKnown RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 NSUN2Q08J23 767 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDH13-204ENST00000539548 GRM3Q14832 879 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 ADRM1Q16186 407 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 NADK2Q4G0N4 442 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 CERCAMQ5T4B2 595 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 BORAQ6PGQ7 559 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 SPATA31D4Q6ZUB0 917 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 LIMS2Q7Z4I7 341 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 PIGZQ86VD9 579 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 LSMEM2Q8N112 164 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 METTL25Q8N6Q8 603 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 BHLHE22Q8NFJ8 381 aaPredicted RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 PDCD6IPQ8WUM4 868 aaKnown RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 NDRG1Q92597 394 aaKnown RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 WNT8BQ93098 351 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 FAM149B1Q96BN6 582 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 TSNARE1Q96NA8 513 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 MLPHQ9BV36 600 aaPredicted RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 DUSP16Q9BY84 665 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 NUF2Q9BZD4 464 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 RBM38Q9H0Z9 239 aaKnown RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 TASP1Q9H6P5 420 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 COPS7BQ9H9Q2 264 aaPredicted RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 ZBTB26Q9HCK0 441 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 IARS2Q9NSE4 1012 aaKnown RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 GDAP2Q9NXN4 497 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 RBPJLQ9UBG7 517 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 STAP1Q9ULZ2 295 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 RUVBL2Q9Y230 463 aaKnown RBP9.83□□□□□ -0.84
CDH13-204ENST00000539548 CDYLQ9Y232 598 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 HES2Q9Y543 173 aa9.83□□□□□ -0.84
CDH13-204ENST00000539548 A0A0G2JLL6 359 aaPredicted RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 TARM1B6A8C7 271 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 H0YJX3 145 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 CFLARO15519 480 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 AMHP03971 560 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 F7P08709 466 aaPredicted RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 FAM58BPP0C7Q3 252 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 ERCC2P18074 760 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 CD68P34810 354 aaPredicted RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 ADRA1BP35368 520 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 CCR10P46092 362 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 NAGLUP54802 743 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 AIF1P55008 147 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 PKNOX1P55347 436 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 ADIGQ0VDE8 80 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 SEMA3BQ13214 749 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 ART3Q13508 389 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 APOFQ13790 326 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 Q3C1V9 767 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 INTS6LQ5JSJ4 861 aaKnown RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 FBXO47Q5MNV8 452 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 SLC27A1Q6PCB7 646 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 KLHDC10Q6PID8 442 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 PRRT2Q7Z6L0 340 aaPredicted RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 TMEM102Q8N9M5 508 aaPredicted RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 SLC16A10Q8TF71 515 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 MOCOSQ96EN8 888 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 CATSPER2Q96P56 530 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 SLC2A13Q96QE2 648 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 HNRNPABQ99729 332 aaKnown RBP9.82□□□□□ -0.84
CDH13-204ENST00000539548 PKP2Q99959 881 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 SLC2A11Q9BYW1 496 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 GBA3Q9H227 469 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 RHOJQ9H4E5 214 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 OCEL1Q9H607 264 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 TXNRD2Q9NNW7 524 aa9.82□□□□□ -0.84
CDH13-204ENST00000539548 CHRAC1Q9NRG0 131 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms