RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 AIF1P55008 147 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 UAP1L1Q3KQV9 507 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 PPM1JQ5JR12 505 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 RETSATQ6NUM9 610 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 DSG4Q86SJ6 1040 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 ARFGAP1Q8N6T3 406 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 OR2A12Q8NGT7 310 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 OR2I1PQ8NGU4 316 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 C1orf216Q8TAB5 229 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 ARHGEF2Q92974 986 aaKnown RBP16.02■□□□□ 0.16
CIT-210ENST00000539413 TRIM11Q96F44 468 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 ACE2Q9BYF1 805 aaPredicted RBP16.02■□□□□ 0.16
CIT-210ENST00000539413 RETREG1Q9H6L5 497 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 GPATCH2LQ9NWQ4 482 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 PPM1HQ9ULR3 514 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 ACTL7AQ9Y615 435 aa16.02■□□□□ 0.16
CIT-210ENST00000539413 PCDH15Q96QU1 1955 aa16.02■□□□□ 0.15
CIT-210ENST00000539413 DOCK4Q8N1I0 1966 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 A0A087X0T9 212 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 ARHGAP33O14559 1287 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 ALOX15BO15296 676 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 BCAT2O15382 392 aaPredicted RBP16.01■□□□□ 0.15
CIT-210ENST00000539413 CREB3O43889 395 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 IGHV4-34P06331 123 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 FAM228BP0C875 321 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 MYBL1P10243 752 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 KCNA4P22459 653 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 EPHB2P29323 1055 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 SERPINH1P50454 418 aaKnown RBP16.01■□□□□ 0.15
CIT-210ENST00000539413 CLCN6P51797 869 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 ATXN3P54252 364 aaPredicted RBP16.01■□□□□ 0.15
CIT-210ENST00000539413 FOXK2Q01167 660 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 SEMA3BQ13214 749 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 POM121L1PQ3SYA9 428 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 DAB2IPQ5VWQ8 1189 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 KIAA0895LQ68EN5 471 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 C22orf39Q6P5X5 142 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 NCEH1Q6PIU2 408 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.01■□□□□ 0.15
CIT-210ENST00000539413 PIP4K2CQ8TBX8 421 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 PEBP4Q96S96 227 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 TNKS2Q9H2K2 1166 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 ARHGAP20Q9P2F6 1191 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 PCSK1NQ9UHG2 260 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.01■□□□□ 0.158e-7■□□□□ 10.9
CIT-210ENST00000539413 SCINQ9Y6U3 715 aa16.01■□□□□ 0.15
CIT-210ENST00000539413 SPTBN4Q9H254 2564 aa16■□□□□ 0.15
CIT-210ENST00000539413 C1QTNF3-AMACRE9PGA6 284 aa16■□□□□ 0.15
CIT-210ENST00000539413 CBFA2T2O43439 604 aa16■□□□□ 0.15
CIT-210ENST00000539413 RAMP2O60895 175 aa16■□□□□ 0.15
CIT-210ENST00000539413 ZNF821O75541 412 aaPredicted RBP16■□□□□ 0.15
CIT-210ENST00000539413 CD160O95971 181 aa16■□□□□ 0.15
CIT-210ENST00000539413 CTSLP07711 333 aa16■□□□□ 0.15
CIT-210ENST00000539413 SYPP08247 313 aa16■□□□□ 0.15
CIT-210ENST00000539413 CHRNA3P32297 505 aa16■□□□□ 0.15
CIT-210ENST00000539413 ETFBP38117 255 aa16■□□□□ 0.15
CIT-210ENST00000539413 ADPRHP54922 357 aa16■□□□□ 0.15
CIT-210ENST00000539413 GRIK2Q13002 908 aa16■□□□□ 0.15
CIT-210ENST00000539413 CA9Q16790 459 aa16■□□□□ 0.15
CIT-210ENST00000539413 FAM46CQ5VWP2 391 aa16■□□□□ 0.15
CIT-210ENST00000539413 VPS36Q86VN1 386 aa16■□□□□ 0.15
CIT-210ENST00000539413 MINDY1Q8N5J2 469 aa16■□□□□ 0.15
CIT-210ENST00000539413 RTL3Q8N8U3 475 aaKnown RBP16■□□□□ 0.15
CIT-210ENST00000539413 CHST14Q8NCH0 376 aa16■□□□□ 0.15
CIT-210ENST00000539413 OR2T34Q8NGX1 318 aa16■□□□□ 0.15
CIT-210ENST00000539413 OR14C36Q8NHC7 312 aa16■□□□□ 0.15
CIT-210ENST00000539413 FNIP1Q8TF40 1166 aa16■□□□□ 0.15
CIT-210ENST00000539413 FAM131CQ96AQ9 280 aa16■□□□□ 0.15
CIT-210ENST00000539413 CCDC114Q96M63 670 aa16■□□□□ 0.15
CIT-210ENST00000539413 EPAS1Q99814 870 aa16■□□□□ 0.15
CIT-210ENST00000539413 ORAI3Q9BRQ5 295 aa16■□□□□ 0.15
CIT-210ENST00000539413 THAP2Q9H0W7 228 aa16■□□□□ 0.15
CIT-210ENST00000539413 MAGEH1Q9H213 219 aa16■□□□□ 0.15
CIT-210ENST00000539413 NOL6Q9H6R4 1146 aaKnown RBP16■□□□□ 0.15
CIT-210ENST00000539413 MRPL47Q9HD33 250 aaKnown RBP16■□□□□ 0.15
CIT-210ENST00000539413 AP4E1Q9UPM8 1137 aa16■□□□□ 0.15
CIT-210ENST00000539413 FCF1Q9Y324 198 aaKnown RBP16■□□□□ 0.15
CIT-210ENST00000539413 LRRC72A6NJI9 287 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 C10orf142B7Z368 130 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 RNF103O00237 685 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 RNF8O76064 485 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 CD27P26842 260 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 MIPP30301 263 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 BNC1Q01954 994 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 SLC20A2Q08357 652 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 CNTN1Q12860 1018 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 POLD3Q15054 466 aaPredicted RBP15.99■□□□□ 0.15
CIT-210ENST00000539413 SPECC1LQ69YQ0 1117 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 LEKR1Q6ZMV7 388 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 CYP4V2Q6ZWL3 525 aaPredicted RBP15.99■□□□□ 0.15
CIT-210ENST00000539413 SNRNP25Q9BV90 132 aaKnown RBP15.99■□□□□ 0.15
CIT-210ENST00000539413 CEP44Q9C0F1 390 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 DHX35Q9H5Z1 703 aaKnown RBP15.99■□□□□ 0.15
CIT-210ENST00000539413 EBF2Q9HAK2 575 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 TM9SF3Q9HD45 589 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 FARP1Q9Y4F1 1045 aaPredicted RBP15.99■□□□□ 0.15
CIT-210ENST00000539413 ADAMTS9Q9P2N4 1935 aa15.99■□□□□ 0.15
CIT-210ENST00000539413 CEP250Q9BV73 2442 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 WASH4PA8MWX3 477 aa15.98■□□□□ 0.15
CIT-210ENST00000539413 LRCH4O75427 683 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms