RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 C9P02748 559 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PRKCBP05771 671 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 FOSL1P15407 271 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 HPCAL1P37235 193 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 AAGABQ6PD74 315 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SPOCD1Q6ZMY3 1216 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 EIF1ADQ8N9N8 165 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PHF20Q9BVI0 1012 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PRPF19Q9UMS4 504 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ARHGEF5Q12774 1597 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 KIAA0391O15091 583 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RAB15P59190 212 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 CCNA1P78396 465 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF280DQ6N043 979 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 POLNQ7Z5Q5 900 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 MCOLN3Q8TDD5 553 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 CRISPLD1Q9H336 500 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 WDR6Q9NNW5 1121 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 BLOC1S4Q9NUP1 217 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SSR3Q9UNL2 185 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 AGAP1Q9UPQ3 857 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ERVK-11Q9UQG0 969 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 DHRS7Q9Y394 339 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SAMHD1Q9Y3Z3 626 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ZSCAN5BA6NJL1 495 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ASLP04424 464 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SCN1BQ07699 218 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF668Q96K58 619 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 MAP3K14Q99558 947 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF341Q9BYN7 854 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PCDH10Q9P2E7 1040 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 GSTK1Q9Y2Q3 226 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 MGRN1O60291 552 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 NFICP08651 508 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TPBGLP0DKB5 382 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PSMA3P25788 255 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 MZF1P28698 734 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PTGER2P43116 358 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RFX3P48380 749 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 MTMR1Q13613 665 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 CLNKQ7Z7G1 428 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TIPINQ9BVW5 301 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PIH1D1Q9NWS0 290 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 KPNA5O15131 536 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 VPS26AO75436 327 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SERPINA6P08185 405 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 THRBP10828 461 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 EPB42P16452 691 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ACAT1P24752 427 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ACOT2P49753 483 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 QRICH1Q2TAL8 776 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 STYK1Q6J9G0 422 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 KCTD8Q6ZWB6 473 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 HERC6Q8IVU3 1022 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 BLOC1S5Q8TDH9 187 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PPP1R14AQ96A00 147 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SLC9A7Q96T83 725 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ACOT9Q9Y305 439 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PDHA2P29803 388 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PRKAA2P54646 552 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ST3GAL1Q11201 340 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ILF2Q12905 390 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 EIF2S3LQ2VIR3 472 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 NIPAL1Q6NVV3 410 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TOP1MTQ969P6 601 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ACOX2Q99424 681 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TDRD1Q9BXT4 1180 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ABCB9Q9NP78 766 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PRAMEF33A0A0G2JMD5 474 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PRAMEF10O60809 474 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SCGNO76038 276 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 H6PDO95479 791 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SLC7A2P52569 658 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RPL6Q02878 288 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 DOK7Q18PE1 504 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 GARNL3Q5VVW2 1013 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SPESP1Q6UW49 350 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 CIR1Q86X95 450 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 C8orf37Q96NL8 207 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 MRPL9Q9BYD2 267 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RPS6KA6Q9UK32 745 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RPH3AQ9Y2J0 694 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ATP7BP35670 1465 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TRIM64A6NGJ6 449 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TRIM64BA6NI03 449 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PRKACAP17612 351 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RRM1P23921 792 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PGDP52209 483 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 CNSTQ6PJW8 725 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SGMS1Q86VZ5 419 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SENP2Q9HC62 589 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 CAPN10Q9HC96 672 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TP73O15350 636 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RGS10O43665 173 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PGRP06401 933 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SDC2P34741 201 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TNK2Q07912 1038 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 AP3B2Q13367 1082 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PON2Q15165 354 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms