RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ANKRD49Q8WVL7 239 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 GJA10Q969M2 543 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 BCL7BQ9BQE9 202 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ZSCAN5AQ9BUG6 496 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 PLA2G12BQ9BX93 195 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 WASH6PQ9NQA3 447 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ZC4H2Q9NQZ6 224 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 GPR25O00155 361 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 SOCS2O14508 198 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC37A4O43826 429 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 NOS1APO75052 506 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 USP12O75317 370 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 AVILO75366 819 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 DNAJB5O75953 348 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 OR7A10O76100 309 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 KCNK2O95069 426 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 SERPINE1P05121 402 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 P4HBP07237 508 aaKnown RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 PCNAP12004 261 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 BMP4P12644 408 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 GSTM2P28161 218 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 SERPINB5P36952 375 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 ALDH7A1P49419 539 aaKnown RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 NT5C2P49902 561 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 ST13P50502 369 aaKnown RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 MAPRE2Q15555 327 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 MSS51Q4VC12 460 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 SHEQ5VZ18 495 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC9A4Q6AI14 798 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 ACAD10Q6JQN1 1059 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 PIWIL3Q7Z3Z3 882 aaKnown RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 LINC00523Q86TU6 105 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 ADCK1Q86TW2 530 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 NDUFAF2Q8N183 169 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 PSMA8Q8TAA3 256 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 CYGBQ8WWM9 190 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 DACT3Q96B18 629 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 CNDP1Q96KN2 507 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 BTN2A3PQ96KV6 586 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 FERD3LQ96RJ6 166 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 CSF3RQ99062 836 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 C1QTNF7Q9BXJ2 289 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 DNMT3LQ9UJW3 386 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 CDY2AQ9Y6F7 541 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 CDY1Q9Y6F8 540 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 TJP1Q07157 1748 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 COL1A1P02452 1464 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 RNF103-CHMP3A0A140T963 221 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 OR5K4A6NMS3 321 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 PI4K2BG5E9Z4 385 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 PLK4O00444 970 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 ZBTB14O43829 449 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 LYPLA1O75608 230 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 GCNT3O95395 438 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 SGPL1O95470 568 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 APOA1P02647 267 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 BMP3P12645 472 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 GABRB2P47870 512 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 MPP1Q00013 466 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 BNC1Q01954 994 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 NFX1Q12986 1120 aaKnown RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 HIST2H2ACQ16777 129 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 FAXCQ5TGI0 409 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 LYPD8Q6UX82 237 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 CCBE1Q6UXH8 406 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 LYSMD2Q8IV50 215 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 NAT8LQ8N9F0 302 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 OR6Q1Q8NGQ2 317 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 RHOXF1Q8NHV9 184 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 SEPT1Q8WYJ6 367 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 LRRC59Q96AG4 307 aaKnown RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 LPIN3Q9BQK8 851 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 C9orf16Q9BUW7 83 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 IDI2Q9BXS1 227 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 PAQR5Q9NXK6 330 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 IFT80Q9P2H3 777 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 MAD2L2Q9UI95 211 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 NOCTQ9UK39 431 aaKnown RBP8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 NRXN3Q9Y4C0 1643 aa8.66□□□□□ -1.02
SRGAP1-202ENST00000537556 CYP2D7A0A087X1C5 515 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 TADA2AO75478 443 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 RFPL1O75677 317 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 SERPINI2O75830 405 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 PROSCO94903 275 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 SLITRK3O94933 977 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 YES1P07947 543 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 TCN1P20061 433 aaPredicted RBP8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 GRK3P35626 688 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 QARSP47897 775 aaKnown RBP8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 HCAR3P49019 387 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 TRAP1Q12931 704 aaKnown RBP8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 BRMS1LQ5PSV4 323 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 MBLAC2Q68D91 279 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 MAVSQ7Z434 540 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC9A9Q8IVB4 645 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 CBR4Q8N4T8 237 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 DHRSXQ8N5I4 330 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms