RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 HS3ST2Q9Y278 367 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 ACACAQ13085 2346 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 URB1O60287 2271 aaKnown RBP8.66□□□□□ -1.02
USP28-203ENST00000537490 KNTC1P50748 2209 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 A0A1W2PQU0 124 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 PRAMEF26H0Y7S4 382 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 KPNA3O00505 521 aaPredicted RBP8.66□□□□□ -1.02
USP28-203ENST00000537490 SLC31A1O15431 190 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 MAGEC1O60732 1142 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 RNGTTO60942 597 aaKnown RBP8.66□□□□□ -1.02
USP28-203ENST00000537490 SDC3O75056 442 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 RFPL3O75679 317 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 F9P00740 461 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 C1SP09871 688 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 PRKCSHP14314 528 aaPredicted RBP8.66□□□□□ -1.02
USP28-203ENST00000537490 GLDCP23378 1020 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 NUDT1P36639 197 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 FLT3P36888 993 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 BPIFB4P59827 614 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 OVGP1Q12889 678 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 RAPGEF1Q13905 1077 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 DPCR1Q3MIW9 517 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 SLC25A52Q3SY17 297 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 SOWAHCQ53LP3 525 aaPredicted RBP8.66□□□□□ -1.02
USP28-203ENST00000537490 ARSIQ5FYB1 569 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 FAM102AQ5T9C2 384 aaPredicted RBP8.66□□□□□ -1.02
USP28-203ENST00000537490 KLHDC7AQ5VTJ3 777 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 TAF3Q5VWG9 929 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 FBXL19Q6PCT2 694 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 LINGO4Q6UY18 593 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 BNIPLQ7Z465 357 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 TFAP2DQ7Z6R9 452 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 SETD3Q86TU7 594 aaPredicted RBP8.66□□□□□ -1.02
USP28-203ENST00000537490 IQCHQ86VS3 1027 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 ERICH1Q86X53 443 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 FAM114A1Q8IWE2 563 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 OXR1Q8N573 874 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 DCAF4L2Q8NA75 395 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 TMEM145Q8NBT3 493 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 TMIEQ8NEW7 156 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 OR7D4Q8NG98 312 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 KLHDC7BQ96G42 594 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 C1orf74Q96LT6 269 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 MYOCQ99972 504 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 TUBGCP2Q9BSJ2 902 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 NAA15Q9BXJ9 866 aaKnown RBP8.66□□□□□ -1.02
USP28-203ENST00000537490 CLSTN2Q9H4D0 955 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 PREBQ9HCU5 417 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 TMEM59LQ9UK28 342 aa8.66□□□□□ -1.02
USP28-203ENST00000537490 ADAMTS20P59510 1910 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 IGLV3-10A0A075B6K4 115 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 E9PAM4 449 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 GOLGA8SH3BPF8 625 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 TRIM38O00635 465 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 SRGAP2O75044 1071 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 ZNF821O75541 412 aaPredicted RBP8.65□□□□□ -1.02
USP28-203ENST00000537490 ZMPSTE24O75844 475 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 ENDOD1O94919 500 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 MMEP08473 750 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 THEGLP0DJG4 465 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 UCHL3P15374 230 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 PRLRP16471 622 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 CKMT2P17540 419 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 OR1E1P30953 314 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 SCNN1AP37088 669 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 TARDBPQ13148 414 aaKnown RBP eCLIP8.65□□□□□ -1.02
USP28-203ENST00000537490 ZNF284Q2VY69 593 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 SETMARQ53H47 684 aaPredicted RBP8.65□□□□□ -1.02
USP28-203ENST00000537490 RAB6CQ53S08 254 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 HES3Q5TGS1 186 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 NEK5Q6P3R8 708 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 LRRC31Q6UY01 552 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 DPY19L3Q6ZPD9 716 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 NOP9Q86U38 636 aaKnown RBP8.65□□□□□ -1.02
USP28-203ENST00000537490 HORMAD1Q86X24 394 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 SLC25A45Q8N413 288 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 CPA5Q8WXQ8 436 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 CRELD1Q96HD1 420 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 LRIG1Q96JA1 1093 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 CFAP57Q96MR6 1250 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 SPON2Q9BUD6 331 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 C2orf49Q9BVC5 232 aaPredicted RBP8.65□□□□□ -1.02
USP28-203ENST00000537490 RAB6CQ9H0N0 254 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 TNKS2Q9H2K2 1166 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 FZD3Q9NPG1 666 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 SCUBE2Q9NQ36 999 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 SAMSN1Q9NSI8 373 aaKnown RBP8.65□□□□□ -1.02
USP28-203ENST00000537490 ZNF212Q9UDV6 495 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 ZFR2Q9UPR6 939 aaKnown RBP8.65□□□□□ -1.02
USP28-203ENST00000537490 FARP1Q9Y4F1 1045 aaPredicted RBP8.65□□□□□ -1.02
USP28-203ENST00000537490 ACTL7AQ9Y615 435 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 WASF2Q9Y6W5 498 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 ATRXP46100 2492 aa8.65□□□□□ -1.02
USP28-203ENST00000537490 ASPMQ8IZT6 3477 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 A0A087WV48 116 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 ILVBLA1L0T0 632 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 PES1O00541 588 aaKnown RBP8.64□□□□□ -1.03
USP28-203ENST00000537490 SIGLEC6O43699 453 aa8.64□□□□□ -1.03
USP28-203ENST00000537490 LEFTY1O75610 366 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms