RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 LINGO4Q6UY18 593 aa24.73■■□□□ 1.55
HMGA2-207ENST00000537275 ZNF572Q7Z3I7 529 aaPredicted RBP24.73■■□□□ 1.55
HMGA2-207ENST00000537275 C12orf50Q8NA57 414 aaPredicted RBP24.73■■□□□ 1.55
HMGA2-207ENST00000537275 SORCS1Q8WY21 1168 aa24.73■■□□□ 1.55
HMGA2-207ENST00000537275 C10orf88Q9H8K7 445 aa24.73■■□□□ 1.55
HMGA2-207ENST00000537275 ACTL7AQ9Y615 435 aa24.73■■□□□ 1.55
HMGA2-207ENST00000537275 SHROOM3Q8TF72 1996 aa24.73■■□□□ 1.55
HMGA2-207ENST00000537275 MT-CO1P00395 513 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 EGFP01133 1207 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 VAV1P15498 845 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 RBL1P28749 1068 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 PTPRNQ16849 979 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 DARS2Q6PI48 645 aaKnown RBP24.72■■□□□ 1.55
HMGA2-207ENST00000537275 LEKR1Q6ZMV7 388 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 CDKL3Q8IVW4 592 aaPredicted RBP24.72■■□□□ 1.55
HMGA2-207ENST00000537275 CYB5D2Q8WUJ1 264 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 MAML1Q92585 1016 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 MAGOHBQ96A72 148 aaKnown RBP24.72■■□□□ 1.55
HMGA2-207ENST00000537275 RPL10LQ96L21 214 aaKnown RBP24.72■■□□□ 1.55
HMGA2-207ENST00000537275 MRGPRX3Q96LB0 322 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 ZNF599Q96NL3 588 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 HCN2Q9UL51 889 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 NDRG2Q9UN36 371 aaKnown RBP24.72■■□□□ 1.55
HMGA2-207ENST00000537275 ERVW-1Q9UQF0 538 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 HS3ST2Q9Y278 367 aa24.72■■□□□ 1.55
HMGA2-207ENST00000537275 STK25O00506 426 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 PHF2O75151 1096 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 VASPP50552 380 aaPredicted RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 GEMIN4P57678 1058 aaKnown RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 CKAP4Q07065 602 aaKnown RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 INO80DQ53TQ3 878 aaPredicted RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 SPATA4Q8NEY3 305 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 UCMAQ8WVF2 138 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 USP29Q9HBJ7 922 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 UBA2Q9UBT2 640 aaPredicted RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 SLC25A13Q9UJS0 675 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 DRG1Q9Y295 367 aaKnown RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 ANTXRLA6NF34 631 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 CCDC188H7C350 402 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 KCNK1O00180 336 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 ITGAVP06756 1048 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 SRPRAP08240 638 aaKnown RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 KIR2DL1P43626 348 aaPredicted RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 STK19P49842 368 aaPredicted RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 SERPINH1P50454 418 aaKnown RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 HNRNPDQ14103 355 aaKnown RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 HEATR6Q6AI08 1181 aaKnown RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 ZNF687Q8N1G0 1237 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 HTR3CQ8WXA8 447 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 MYO19Q96H55 970 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 TMEM121Q9BTD3 319 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 PLA2G4CQ9UP65 541 aa24.71■■□□□ 1.55
HMGA2-207ENST00000537275 MRPS17Q9Y2R5 130 aaKnown RBP24.71■■□□□ 1.55
HMGA2-207ENST00000537275 MUC3AQ02505 3323 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 MTSS1O43312 755 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 DCXO43602 365 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 CCNB1P14635 433 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 KCNJ1P48048 391 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 CLCN6P51797 869 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 SLC10A7Q0GE19 358 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 CCINQ13939 588 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 RFTN1Q14699 578 aaPredicted RBP24.7■■□□□ 1.54
HMGA2-207ENST00000537275 TMCO4Q5TGY1 634 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 EMC10Q5UCC4 262 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 TTC27Q6P3X3 843 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 SH2D3CQ8N5H7 860 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 TEX26Q8N6G2 289 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 CASKIN2Q8WXE0 1202 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 L2HGDHQ9H9P8 463 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 RBM12Q9NTZ6 932 aaKnown RBP24.7■■□□□ 1.54
HMGA2-207ENST00000537275 SLCO3A1Q9UIG8 710 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 ZNF148Q9UQR1 794 aa24.7■■□□□ 1.54
HMGA2-207ENST00000537275 K7ERQ8 282 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 CHRM1P11229 460 aaPredicted RBP24.69■■□□□ 1.54
HMGA2-207ENST00000537275 SRCP12931 536 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 HNRNPLP14866 589 aaKnown RBP eCLIP24.69■■□□□ 1.545e-10■■■□□ 15.3
HMGA2-207ENST00000537275 COILP38432 576 aaPredicted RBP24.69■■□□□ 1.54
HMGA2-207ENST00000537275 RENBPP51606 427 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 SEC13P55735 322 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 IFI35P80217 286 aaPredicted RBP24.69■■□□□ 1.54
HMGA2-207ENST00000537275 LBRQ14739 615 aaKnown RBP24.69■■□□□ 1.54
HMGA2-207ENST00000537275 FBXO43Q4G163 708 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 MARC1Q5VT66 337 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 ATP11CQ8NB49 1132 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 KDM1BQ8NB78 822 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 NSMCE1Q8WV22 266 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 EDAQ92838 391 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 ZNF419Q96HQ0 510 aaPredicted RBP24.69■■□□□ 1.54
HMGA2-207ENST00000537275 IL12RB2Q99665 862 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 DDX47Q9H0S4 455 aaKnown RBP24.69■■□□□ 1.54
HMGA2-207ENST00000537275 THAP10Q9P2Z0 257 aaPredicted RBP24.69■■□□□ 1.54
HMGA2-207ENST00000537275 A0A0C4DFX4 3053 aa24.69■■□□□ 1.54
HMGA2-207ENST00000537275 MUC22E2RYF6 1773 aaPredicted RBP24.68■■□□□ 1.54
HMGA2-207ENST00000537275 KANSL1LA0AUZ9 987 aa24.68■■□□□ 1.54
HMGA2-207ENST00000537275 CFAP69A5D8W1 941 aa24.68■■□□□ 1.54
HMGA2-207ENST00000537275 KCNN4O15554 427 aa24.68■■□□□ 1.54
HMGA2-207ENST00000537275 SMAD6O43541 496 aaKnown RBP24.68■■□□□ 1.54
HMGA2-207ENST00000537275 ZNF189O75820 626 aaPredicted RBP24.68■■□□□ 1.54
HMGA2-207ENST00000537275 STIP1P31948 543 aaKnown RBP24.68■■□□□ 1.54
HMGA2-207ENST00000537275 CHRNA3P32297 505 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms