RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 NCKAP1Q9Y2A7 1128 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 BCAT2O15382 392 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 CCP110O43303 1012 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 KCNK5O95279 499 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FTLP02792 175 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ADRB1P08588 477 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SRCP12931 536 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 KCNA4P22459 653 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FECHP22830 423 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GLDCP23378 1020 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ZNF143P52747 638 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 KRT83P78385 493 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ASTE1Q2TB18 679 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ALKBH5Q6P6C2 394 aaKnown RBP18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 Q6ZVU0 165 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 CCDC170Q8IYT3 715 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MINDY1Q8N5J2 469 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 OR7D4Q8NG98 312 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GANCQ8TET4 914 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SNX19Q92543 992 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 NTAN1Q96AB6 310 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 VCPIP1Q96JH7 1222 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 C2orf49Q9BVC5 232 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SPEGQ15772 3267 aa18.29■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ILVBLA1L0T0 632 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 C10orf142B7Z368 130 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 LRIG2O94898 1065 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ADH1BP00325 375 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 IL1BP01584 269 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SYPP08247 313 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 C5AR1P21730 350 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 DRD3P35462 400 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 CYLC1P35663 651 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 METAP1P53582 386 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ATXN3P54252 364 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GALCP54803 685 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 OGDHQ02218 1023 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GRIK2Q13002 908 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 CCDC122Q5T0U0 273 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ZNF783Q6ZMS7 281 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 NLRP14Q86W24 1093 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 DNAAF5Q86Y56 855 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 TRIM11Q96F44 468 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 OMDQ99983 421 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ORAI3Q9BRQ5 295 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ISCUQ9H1K1 167 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 NDFIP2Q9NV92 336 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SARDHQ9UL12 918 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FZD4Q9ULV1 537 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 TRPM6Q9BX84 2022 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 K7ERQ8 282 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GIPC1O14908 333 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MCF2LO15068 1137 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SMAD6O43541 496 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 RNASEH2AO75792 299 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 IGHV4-34P06331 123 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SCAPQ12770 1279 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SFSWAPQ12872 951 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 PSAPL1Q6NUJ1 521 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 NCEH1Q6PIU2 408 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 LINGO4Q6UY18 593 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 HDDC3Q8N4P3 179 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ATP11CQ8NB49 1132 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 OR8D1Q8WZ84 308 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FAM131CQ96AQ9 280 aa18.28■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FAM47DPA6NHR8 397 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ATMINO43313 823 aaPredicted RBP18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 NRDCO43847 1150 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 GJB3O75712 270 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ZMPSTE24O75844 475 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 FSBPO95073 299 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PTMAP06454 111 aaKnown RBP18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 GOT1P17174 413 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 NOVA1P51513 510 aaKnown RBP18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 BNC1Q01954 994 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 GNA12Q03113 381 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SEMA3BQ13214 749 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 MAMLD1Q13495 774 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 KIAA0895LQ68EN5 471 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PLEKHA7Q6IQ23 1121 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 DCUN1D2Q6PH85 259 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SLFN11Q7Z7L1 901 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CCDC112Q8NEF3 446 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PDLIM2Q96JY6 352 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CNPY3Q9BT09 278 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SPTLC3Q9NUV7 552 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 DNAAF2Q9NVR5 837 aaKnown RBP18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TMEM248Q9NWD8 314 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PPM1HQ9ULR3 514 aa18.27■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SOWAHDA6NJG2 315 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PLK4O00444 970 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ALOX15BO15296 676 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 BNIP3LO60238 219 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 OPHN1O60890 802 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 IPO7O95373 1038 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 MYBL1P10243 752 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RHOQP17081 205 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CSRP1P21291 193 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ADPRHP54922 357 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ARF5P84085 180 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms