RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 CDHR3Q6ZTQ4 885 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 CIR1Q86X95 450 aaPredicted RBP23.11■■□□□ 1.29
HMGA2-206ENST00000536545 ZNF75CPQ92670 426 aaPredicted RBP23.11■■□□□ 1.29
HMGA2-206ENST00000536545 MYRFLQ96LU7 910 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 ZNF512Q96ME7 567 aaPredicted RBP23.11■■□□□ 1.29
HMGA2-206ENST00000536545 FAM111AQ96PZ2 611 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 IL1RAPL1Q9NZN1 696 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 ZFATQ9P243 1243 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 TRIM43BA6NCK2 446 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 MYO1CO00159 1063 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 ATP9BO43861 1147 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 EDF1O60869 148 aaKnown RBP23.1■■□□□ 1.29
HMGA2-206ENST00000536545 CSF2RAP15509 400 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 ATP5C1P36542 298 aaKnown RBP23.1■■□□□ 1.29
HMGA2-206ENST00000536545 TNK2Q07912 1038 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 HNRNPDQ14103 355 aaKnown RBP23.1■■□□□ 1.29
HMGA2-206ENST00000536545 DENND5AQ6IQ26 1287 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 FBXO46Q6PJ61 603 aaPredicted RBP23.1■■□□□ 1.29
HMGA2-206ENST00000536545 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.1■■□□□ 1.29
HMGA2-206ENST00000536545 OTUD6BQ8N6M0 293 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 IPMKQ8NFU5 416 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 CCT6BQ92526 530 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 TRIM43Q96BQ3 446 aaPredicted RBP23.1■■□□□ 1.29
HMGA2-206ENST00000536545 PAWRQ96IZ0 340 aaKnown RBP23.1■■□□□ 1.29
HMGA2-206ENST00000536545 FICDQ9BVA6 458 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 KIFC1Q9BW19 673 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 PITPNM3Q9BZ71 974 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 PRKAG3Q9UGI9 489 aa23.1■■□□□ 1.29
HMGA2-206ENST00000536545 J3KR12 359 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 GJB5O95377 273 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 TPH1P17752 444 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 BTG3Q14201 252 aaPredicted RBP23.09■■□□□ 1.29
HMGA2-206ENST00000536545 PARP15Q460N3 678 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 HECTD3Q5T447 861 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 RNF187Q5TA31 235 aaPredicted RBP23.09■■□□□ 1.29
HMGA2-206ENST00000536545 CCDC121Q6ZUS5 278 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 CNPY4Q8N129 248 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 MFSD3Q96ES6 412 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 TRMT2BQ96GJ1 504 aaKnown RBP23.09■■□□□ 1.29
HMGA2-206ENST00000536545 CPNE1Q99829 537 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 SLC25A51Q9H1U9 297 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 SLCO1B3Q9NPD5 702 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 PCMTD2Q9NV79 361 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 SPG21Q9NZD8 308 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 STARD13Q9Y3M8 1113 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 KIAA0355O15063 1070 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 COCHO43405 550 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 RAMP2O60895 175 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 EFCAB14O75071 495 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 GP5P40197 560 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 RAB33AQ14088 237 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 FAM133BQ5BKY9 247 aaKnown RBP23.09■■□□□ 1.29
HMGA2-206ENST00000536545 DDX53Q86TM3 631 aaKnown RBP23.09■■□□□ 1.29
HMGA2-206ENST00000536545 CCDC117Q8IWD4 279 aaPredicted RBP23.09■■□□□ 1.29
HMGA2-206ENST00000536545 TEX26Q8N6G2 289 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 SP110Q9HB58 689 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 CYP4F11Q9HBI6 524 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 PHTF1Q9UMS5 762 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 PLLPQ9Y342 182 aa23.09■■□□□ 1.29
HMGA2-206ENST00000536545 KIAA1671Q9BY89 1806 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 CCT8L1PA6NM43 557 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 F5H5T6 163 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 ACSL4O60488 711 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 ALDOAP04075 364 aaKnown RBP23.08■■□□□ 1.29
HMGA2-206ENST00000536545 URODP06132 367 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 SLC6A4P31645 630 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 RENBPP51606 427 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 SMAD1Q15797 465 aaKnown RBP23.08■■□□□ 1.29
HMGA2-206ENST00000536545 KDELC1Q6UW63 502 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 ACMSDQ8TDX5 336 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 PSMG2Q969U7 264 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 MRGPRX2Q96LB1 330 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 IQCGQ9H095 443 aaKnown RBP23.08■■□□□ 1.29
HMGA2-206ENST00000536545 CHRAC1Q9NRG0 131 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 ARL2BPQ9Y2Y0 163 aa23.08■■□□□ 1.29
HMGA2-206ENST00000536545 NEBLO76041 1014 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 ITGA2BP08514 1039 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 SERPINB4P48594 390 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 MPP3Q13368 585 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 SERINC3Q13530 473 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 SPRED3Q2MJR0 410 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 LGI2Q8N0V4 545 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 PLD4Q96BZ4 506 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 IMP4Q96G21 291 aaKnown RBP23.07■■□□□ 1.28
HMGA2-206ENST00000536545 NACA2Q9H009 215 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 KDM4CQ9H3R0 1056 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 ENTPD7Q9NQZ7 604 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 PTPRSQ13332 1948 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 MYLKQ15746 1914 aa23.07■■□□□ 1.28
HMGA2-206ENST00000536545 WDR91A4D1P6 747 aa23.06■■□□□ 1.28
HMGA2-206ENST00000536545 CARNS1A5YM72 827 aa23.06■■□□□ 1.28
HMGA2-206ENST00000536545 NMBRP28336 390 aa23.06■■□□□ 1.28
HMGA2-206ENST00000536545 CRHR1P34998 444 aa23.06■■□□□ 1.28
HMGA2-206ENST00000536545 ALDH1A3P47895 512 aa23.06■■□□□ 1.28
HMGA2-206ENST00000536545 YBEYP58557 167 aaPredicted RBP23.06■■□□□ 1.28
HMGA2-206ENST00000536545 IL10RBQ08334 325 aa23.06■■□□□ 1.28
HMGA2-206ENST00000536545 SLC10A7Q0GE19 358 aa23.06■■□□□ 1.28
HMGA2-206ENST00000536545 PLD1Q13393 1074 aa23.06■■□□□ 1.28
HMGA2-206ENST00000536545 POLD3Q15054 466 aaPredicted RBP23.06■■□□□ 1.28
HMGA2-206ENST00000536545 TEDDM1Q5T9Z0 273 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms