RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 CADM4Q8NFZ8 388 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 SNX19Q92543 992 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 HSPH1Q92598 858 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 ARHGEF26Q96DR7 871 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 MRFAP1L1Q96HT8 127 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 CHP1Q99653 195 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 SGK2Q9HBY8 427 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 SPTLC3Q9NUV7 552 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 ZNF212Q9UDV6 495 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 SUSD2Q9UGT4 822 aa13.68□□□□□ -0.22
CAPN1-227ENST00000533909 CDV3Q9UKY7 258 aaKnown RBP13.68□□□□□ -0.22
CAPN1-227ENST00000533909 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.68□□□□□ -0.22
CAPN1-227ENST00000533909 ATXN2Q99700 1313 aaKnown RBP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 PLXND1Q9Y4D7 1925 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 A0A1W2PP55 124 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 ZSCAN5CA6NGD5 496 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 FAM47DPA6NHR8 397 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 LRRC72A6NJI9 287 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 H3BRJ5 948 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 K7ERQ8 282 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 ALOX15BO15296 676 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 BUB1O43683 1085 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 SEMA4FO95754 770 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 IGLV3-19P01714 112 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 GNSP15586 552 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 C5AR1P21730 350 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 GLDCP23378 1020 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 HOXD12P35452 270 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 SERPINH1P50454 418 aaKnown RBP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 YBEYP58557 167 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 KRT81Q14533 505 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 SMTNL2Q2TAL5 461 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 PARP15Q460N3 678 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 ZFYVE27Q5T4F4 411 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 DAB2IPQ5VWQ8 1189 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 C22orf39Q6P5X5 142 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 RFX8Q6ZV50 586 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 CEP76Q8TAP6 659 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 FRS2Q8WU20 508 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 ARHGEF2Q92974 986 aaKnown RBP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 BTBD6Q96KE9 485 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 PEBP4Q96S96 227 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 KCTD15Q96SI1 283 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 FAM129BQ96TA1 746 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 NUSAP1Q9BXS6 441 aaKnown RBP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 CEP44Q9C0F1 390 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 MIR1-1HGQ9H1L0 117 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 TNKS2Q9H2K2 1166 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 LUC7LQ9NQ29 371 aaKnown RBP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 DYRK4Q9NR20 520 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.67□□□□□ -0.22
CAPN1-227ENST00000533909 NDFIP2Q9NV92 336 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 DOCK4Q8N1I0 1966 aa13.67□□□□□ -0.22
CAPN1-227ENST00000533909 CFAP54Q96N23 3096 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-227ENST00000533909 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 GOLGA6L6A8MZA4 724 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 RASA4BC9J798 803 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 MCF2LO15068 1137 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 RASA4O43374 803 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 SMAD6O43541 496 aaKnown RBP13.66□□□□□ -0.22
CAPN1-227ENST00000533909 FSBPO95073 299 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 IPO7O95373 1038 aaKnown RBP13.66□□□□□ -0.22
CAPN1-227ENST00000533909 PRNPP04156 253 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 TMEM253P0C7T8 217 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 GOT1P17174 413 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 GJC1P36383 396 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 SEMA3BQ13214 749 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 SPA17Q15506 151 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 CA9Q16790 459 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 ASTE1Q2TB18 679 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-227ENST00000533909 TRIM61Q5EBN2 209 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 PLA2G2CQ5R387 149 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 TCEAL6Q6IPX3 200 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 GAS2L3Q86XJ1 694 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 SLC41A1Q8IVJ1 513 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 ARFGAP1Q8N6T3 406 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 PCDH20Q8N6Y1 951 aaKnown RBP13.66□□□□□ -0.22
CAPN1-227ENST00000533909 NIPA2Q8N8Q9 360 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 GRIN3AQ8TCU5 1115 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 TCEAL3Q969E4 200 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 ZNF419Q96HQ0 510 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-227ENST00000533909 ACE2Q9BYF1 805 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-227ENST00000533909 PCED1AQ9H1Q7 454 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 FZD4Q9ULV1 537 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 NEU3Q9UQ49 428 aa13.66□□□□□ -0.22
CAPN1-227ENST00000533909 CXorf51AA0A1B0GTR3 108 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 WASH4PA8MWX3 477 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 KPNA3O00505 521 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-227ENST00000533909 KDELR3O43731 214 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 ZMPSTE24O75844 475 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 TGM1P22735 817 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms