RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 PTPN3P26045 913 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 PIK3R1P27986 724 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 GRIK4Q16099 956 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 ANKRD20A4Q4UJ75 823 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 STXBP5Q5T5C0 1151 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 LRRC40Q9H9A6 602 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 TMEM233B4DJY2 109 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 TLR1Q15399 786 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 LSM12Q3MHD2 195 aaKnown RBP19.68■□□□□ 0.74
CAPN1-226ENST00000533820 OTUD1Q5VV17 481 aaPredicted RBP19.68■□□□□ 0.74
CAPN1-226ENST00000533820 PAOXQ6QHF9 649 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 CNBD2Q96M20 576 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 MED10Q9BTT4 135 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 STN1Q9H668 368 aaKnown RBP19.68■□□□□ 0.74
CAPN1-226ENST00000533820 LRRC4Q9HBW1 653 aa19.68■□□□□ 0.74
CAPN1-226ENST00000533820 HACD1B0YJ81 288 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 ATP5BP06576 529 aaKnown RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 VARSP26640 1264 aaKnown RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 NMBRP28336 390 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 LIMK2P53671 638 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 MTTPP55157 894 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 CBLBQ13191 982 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 ARL13AQ5H913 290 aaPredicted RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 CYS1Q717R9 158 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 KCNMB4Q86W47 210 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 SNX31Q8N9S9 440 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 TMA16Q96EY4 203 aaKnown RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 VPS39Q96JC1 886 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 PFDN4Q9NQP4 134 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 DNAJC25-GNG10A0A024R161 153 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 C15orf38-AP3S2A0A0A6YYH1 394 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 SLC25A27O95847 323 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 HOXD12P35452 270 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 GRIA4P48058 902 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 OXCT1P55809 520 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 MAP3K7CLP57077 242 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 FLOT2Q14254 428 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 GRM3Q14832 879 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 CCDC153Q494R4 210 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 IYDQ6PHW0 289 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 ARPINQ7Z6K5 226 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 ZNF554Q86TJ5 538 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 NPWQ8N729 165 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 PNPLA1Q8N8W4 532 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 PIP4K2CQ8TBX8 421 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 KCTD4Q8WVF5 259 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 SNX27Q96L92 541 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 ILKAPQ9H0C8 392 aaPredicted RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 PAPPA2Q9BXP8 1791 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 ZCWPW2A0A1B0GU75 182 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 I6L893 689 aaPredicted RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 PMLP29590 882 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 SOX4Q06945 474 aaPredicted RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 HNRNPDQ14103 355 aaKnown RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 SPANXN3Q5MJ09 141 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 SH2D4BQ5SQS7 431 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 ARHGAP17Q68EM7 881 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 STRADAQ7RTN6 431 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 KBTBD6Q86V97 674 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 SPATA24Q86W54 205 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 DSELQ8IZU8 1212 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 APPL2Q8NEU8 664 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 ZSCAN18Q8TBC5 510 aaPredicted RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 SHROOM3Q8TF72 1996 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 KCNK16Q96T55 309 aa19.67■□□□□ 0.74
CAPN1-226ENST00000533820 ACE2Q9BYF1 805 aaPredicted RBP19.67■□□□□ 0.74
CAPN1-226ENST00000533820 NRP1O14786 923 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 NFKB1P19838 968 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 CNGA3Q16281 694 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 INSCQ1MX18 579 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 MARCH8Q5T0T0 291 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 SIX6OS1Q8N1H7 587 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 EDEM1Q92611 657 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 JADE3Q92613 823 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 DCUN1D1Q96GG9 259 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 C16orf70Q9BSU1 422 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 NAT9Q9BTE0 207 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 TIMM13Q9Y5L4 95 aaPredicted RBP19.66■□□□□ 0.74
CAPN1-226ENST00000533820 ZBTB17Q13105 803 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 USP10Q14694 798 aaKnown RBP19.66■□□□□ 0.74
CAPN1-226ENST00000533820 ADGRG6Q86SQ4 1221 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 PSTKQ8IV42 348 aaKnown RBP19.66■□□□□ 0.74
CAPN1-226ENST00000533820 LINC01465Q8N7H1 131 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 ZDHHC2Q9UIJ5 367 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 TLK1Q9UKI8 766 aa19.66■□□□□ 0.74
CAPN1-226ENST00000533820 JCHAINP01591 159 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 MS4A2Q01362 244 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 BTKQ06187 659 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 LAMC2Q13753 1193 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 IL31Q6EBC2 164 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 TMC7Q7Z402 723 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 OSTM1Q86WC4 334 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 PQLC1Q8N2U9 271 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 RUVBL2Q9Y230 463 aaKnown RBP19.65■□□□□ 0.74
CAPN1-226ENST00000533820 TRPA1O75762 1119 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 STAU1O95793 577 aaKnown RBP19.65■□□□□ 0.74
CAPN1-226ENST00000533820 GLUD2P49448 558 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 CHN2P52757 468 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 TPI1P60174 286 aa19.65■□□□□ 0.74
CAPN1-226ENST00000533820 CTBP1Q13363 440 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms