RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 PCSK1NQ9UHG2 260 aa16.19■□□□□ 0.18
TSKU-204ENST00000533752 EVLQ9UI08 416 aaPredicted RBP16.19■□□□□ 0.18
TSKU-204ENST00000533752 FZD4Q9ULV1 537 aa16.19■□□□□ 0.18
TSKU-204ENST00000533752 SPTBN4Q9H254 2564 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 MEI4A8MW99 385 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 EEF2KO00418 725 aaKnown RBP16.18■□□□□ 0.18
TSKU-204ENST00000533752 KHNYNO15037 678 aaKnown RBP16.18■□□□□ 0.18
TSKU-204ENST00000533752 MID1O15344 667 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 ZMPSTE24O75844 475 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 IL1BP01584 269 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 SLC8A1P32418 973 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 ZNF75DP51815 510 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 BOLA3Q53S33 107 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 C22orf39Q6P5X5 142 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 FAM124AQ86V42 546 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 SLC41A1Q8IVJ1 513 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 PCDH20Q8N6Y1 951 aaKnown RBP16.18■□□□□ 0.18
TSKU-204ENST00000533752 NETO1Q8TDF5 533 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 ARHGEF26Q96DR7 871 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 PEBP4Q96S96 227 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 FAM129BQ96TA1 746 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 OMDQ99983 421 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 MAGEB5Q9BZ81 275 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 ZWILCHQ9H900 591 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 NDFIP2Q9NV92 336 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 GPATCH2LQ9NWQ4 482 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 CTTNBP2NLQ9P2B4 639 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 PILRBQ9UKJ0 227 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.18■□□□□ 0.18
TSKU-204ENST00000533752 RALGAPA1Q6GYQ0 2036 aa16.18■□□□□ 0.18
TSKU-204ENST00000533752 NYNRINQ9P2P1 1898 aaKnown RBP16.17■□□□□ 0.18
TSKU-204ENST00000533752 MCF2LO15068 1137 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 DAPK3O43293 454 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 SEMA4FO95754 770 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 MT-CO1P00395 513 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 TMEM253P0C7T8 217 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 VAV1P15498 845 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 GNSP15586 552 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 ITPKAP23677 461 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 ACVRL1P37023 503 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 HCAR3P49019 387 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 ARF5P84085 180 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 CCDC6Q16204 474 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 LINGO4Q6UY18 593 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 RFX8Q6ZV50 586 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 CYP4V2Q6ZWL3 525 aaPredicted RBP16.17■□□□□ 0.18
TSKU-204ENST00000533752 ZNF354CQ86Y25 554 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 RGL4Q8IZJ4 473 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 UMODL1-AS1Q8N2C9 162 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 TEKT4Q8WW24 435 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 CASKIN2Q8WXE0 1202 aa16.17■□□□□ 0.18
TSKU-204ENST00000533752 ISG20Q96AZ6 181 aaKnown RBP16.17■□□□□ 0.18
TSKU-204ENST00000533752 KCTD15Q96SI1 283 aaPredicted RBP16.17■□□□□ 0.18
TSKU-204ENST00000533752 CDV3Q9UKY7 258 aaKnown RBP16.17■□□□□ 0.18
TSKU-204ENST00000533752 TPX2Q9ULW0 747 aaKnown RBP16.17■□□□□ 0.18
TSKU-204ENST00000533752 NUP205Q92621 2012 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 A0A1W2PP55 124 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 LRRC72A6NJI9 287 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 H3BRJ5 948 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 SLC7A4O43246 635 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 KDELR3O43731 214 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 BNIP3LO60238 219 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 RNASEH2AO75792 299 aaKnown RBP16.16■□□□□ 0.18
TSKU-204ENST00000533752 PRNPP04156 253 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 GOT1P17174 413 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 GLDCP23378 1020 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 ARL4AP40617 200 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 NDST2P52849 883 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 LIMK1P53667 647 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 CCDC15Q0P6D6 951 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 SF3A2Q15428 464 aaKnown RBP16.16■□□□□ 0.18
TSKU-204ENST00000533752 DPYSL2Q16555 572 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 CA9Q16790 459 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 HADHQ16836 314 aaKnown RBP16.16■□□□□ 0.18
TSKU-204ENST00000533752 DUOXA1Q1HG43 343 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 PPP6R3Q5H9R7 873 aaPredicted RBP16.16■□□□□ 0.18
TSKU-204ENST00000533752 DEFB119Q8N690 84 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 DNASE2BQ8WZ79 361 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 CHP1Q99653 195 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 NUSAP1Q9BXS6 441 aaKnown RBP16.16■□□□□ 0.18
TSKU-204ENST00000533752 INTUQ9ULD6 942 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 PPM1HQ9ULR3 514 aa16.16■□□□□ 0.18
TSKU-204ENST00000533752 TNRC6BQ9UPQ9 1833 aaKnown RBP16.16■□□□□ 0.18
TSKU-204ENST00000533752 ATXN2Q99700 1313 aaKnown RBP16.16■□□□□ 0.18
TSKU-204ENST00000533752 GON4LQ3T8J9 2241 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 CHD5Q8TDI0 1954 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 METTL12A8MUP2 240 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 RASA4BC9J798 803 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 K7ERQ8 282 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 RASA4O43374 803 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 SMAD6O43541 496 aaKnown RBP16.15■□□□□ 0.18
TSKU-204ENST00000533752 ACSL1P33121 698 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 MAN1A1P33908 653 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 TRIM61Q5EBN2 209 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 DCAF12L1Q5VU92 463 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 SLC23A3Q6PIS1 610 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 GAS2L3Q86XJ1 694 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 RHOT2Q8IXI1 618 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 PLPP6Q8IY26 295 aa16.15■□□□□ 0.18
TSKU-204ENST00000533752 HDDC3Q8N4P3 179 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms