RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 WDCPQ9H6R7 721 aa17.51■□□□□ 0.39
RPUSD4-207ENST00000532800 CAAP1Q9H8G2 361 aa17.51■□□□□ 0.39
RPUSD4-207ENST00000532800 PREBQ9HCU5 417 aa17.51■□□□□ 0.39
RPUSD4-207ENST00000532800 MPP6Q9NZW5 540 aa17.51■□□□□ 0.39
RPUSD4-207ENST00000532800 DOCK4Q8N1I0 1966 aa17.51■□□□□ 0.39
RPUSD4-207ENST00000532800 BPTFQ12830 3046 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 A0A0D9SEW6 157 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 KPNA3O00505 521 aaPredicted RBP17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 SMAD6O43541 496 aaKnown RBP17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 RNGTTO60942 597 aaKnown RBP17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 JUPP14923 745 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 GLDCP23378 1020 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 CHRNA3P32297 505 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 NUDT1P36639 197 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 KRT83P78385 493 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 DEUP1Q05D60 604 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 RAPGEF1Q13905 1077 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 STAT4Q14765 748 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 TPD52L1Q16890 204 aaPredicted RBP17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 SETMARQ53H47 684 aaPredicted RBP17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 C2CD6Q53TS8 623 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 MIIPQ5JXC2 388 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 ARTNQ5T4W7 220 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 TRNP1Q6NT89 227 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 FBXL19Q6PCT2 694 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 MLKLQ8NB16 471 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 CHST14Q8NCH0 376 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 NT5C3BQ969T7 300 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 FZD3Q9NPG1 666 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 RRN3Q9NYV6 651 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 STAP1Q9ULZ2 295 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 FHOD1Q9Y613 1164 aa17.5■□□□□ 0.39
RPUSD4-207ENST00000532800 TDRD6O60522 2096 aaKnown RBP17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 A0A087WV48 116 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 A0A1W2PQU0 124 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 E9PAM4 449 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 PRAMEF26H0Y7S4 382 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 SLC31A1O15431 190 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 MAGEC1O60732 1142 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 C1SP09871 688 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 PRKCSHP14314 528 aaPredicted RBP17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 CYP11B1P15538 503 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 CDH5P33151 784 aaPredicted RBP17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 HNF1BP35680 557 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 SNX16P57768 344 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 OVGP1Q12889 678 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 TARDBPQ13148 414 aaKnown RBP eCLIP17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 DRAP1Q14919 205 aaPredicted RBP17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 ACAP1Q15027 740 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 FAM102AQ5T9C2 384 aaPredicted RBP17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 TAF3Q5VWG9 929 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 XYLT1Q86Y38 959 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 ZDHHC17Q8IUH5 632 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 DCAF4L2Q8NA75 395 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 TMEM145Q8NBT3 493 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 TMEM35BQ8NCS4 154 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 OR7D4Q8NG98 312 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 GRIN3AQ8TCU5 1115 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 NXPE2Q96DL1 559 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 PGAP3Q96FM1 320 aaPredicted RBP17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 DCBLD2Q96PD2 775 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 BBC3Q96PG8 261 aaPredicted RBP17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 C2orf49Q9BVC5 232 aaPredicted RBP17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 PDCL3Q9H2J4 239 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 TNKS2Q9H2K2 1166 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 NDST4Q9H3R1 872 aa17.49■□□□□ 0.39
RPUSD4-207ENST00000532800 DRGXA6NNA5 263 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 THEGLP0DJG4 465 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 FLT3P36888 993 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 GABRB2P47870 512 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 KCNMA1Q12791 1236 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 ZNF284Q2VY69 593 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 PROX2Q3B8N5 592 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 DPCR1Q3MIW9 517 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 SLC25A52Q3SY17 297 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 VWA3BQ502W6 1294 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 C6orf118Q5T5N4 469 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 C22orf39Q6P5X5 142 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 SETD3Q86TU7 594 aaPredicted RBP17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 C18orf8Q96DM3 657 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 KLHDC7BQ96G42 594 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 TUBGCP2Q9BSJ2 902 aa17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 ZFR2Q9UPR6 939 aaKnown RBP17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 FARP1Q9Y4F1 1045 aaPredicted RBP17.48■□□□□ 0.39
RPUSD4-207ENST00000532800 IGLV3-10A0A075B6K4 115 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 GOLGA8SH3BPF8 625 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 TRIM38O00635 465 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 TLX3O43711 291 aaPredicted RBP17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 ENDOD1O94919 500 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 CDK4P11802 303 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 CKMT2P17540 419 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 OR1E1P30953 314 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 SCNN1AP37088 669 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 BPIFB4P59827 614 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 ARSIQ5FYB1 569 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 SMYD5Q6GMV2 418 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 LRRC31Q6UY01 552 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 HORMAD1Q86X24 394 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 TMIEQ8NEW7 156 aa17.47■□□□□ 0.39
RPUSD4-207ENST00000532800 OR13H1Q8NG92 308 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms