RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 XKR3Q5GH77 459 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SPATA46Q5T0L3 261 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SFRP5Q5T4F7 317 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ATAD3BQ5T9A4 648 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 BTBD8Q5XKL5 378 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 CDC73Q6P1J9 531 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 DENND1BQ6P3S1 775 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 MOXD1Q6UVY6 613 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 RBM12BQ8IXT5 1001 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ZGPATQ8N5A5 531 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 IL22RA1Q8N6P7 574 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ZNF366Q8N895 744 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 OR52E1Q8NGJ3 308 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SMARCC2Q8TAQ2 1214 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ARHGAP45Q92619 1136 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SYN2Q92777 582 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 PGAM5Q96HS1 289 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 LINC00615Q96LM1 132 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 CATSPER2Q96P56 530 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 ASCC2Q9H1I8 757 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 C8orf33Q9H7E9 229 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 POLR1BQ9H9Y6 1135 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SSU72Q9NP77 194 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 SLAMF7Q9NQ25 335 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 PRMT8Q9NR22 394 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 IL20Q9NYY1 176 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 IL1RAPL1Q9NZN1 696 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 CNOT11Q9UKZ1 510 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 BAG5Q9UL15 447 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 STX8Q9UNK0 236 aa5.38□□□□□ -1.55
ECHDC1-222ENST00000531967 PNMA6EA0A0J9YXQ4 647 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 A0A1W2PQM1 296 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 OR2W5A6NFC9 320 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FAM47DPA6NHR8 397 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 CDRT15L2A8MXV6 281 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 NDUFS8O00217 210 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 E2F3O00716 465 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 OPHN1O60890 802 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 UPP2O95045 317 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 SCAF4O95104 1147 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 LY86O95711 162 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 ANXA8P13928 327 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 S100A5P33763 92 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 KCNC3Q14003 757 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 HNRNPDQ14103 355 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FAM187BQ17R55 369 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 ANXA8L1Q5VT79 327 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FCRL6Q6DN72 434 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 DPY19L2P1Q6NXN4 242 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 NEK5Q6P3R8 708 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 METAP1DQ6UB28 335 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 PARS2Q7L3T8 475 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 PROSER1Q86XN7 944 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 CCDC83Q8IWF9 413 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 ARHGAP12Q8IWW6 846 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 SLC7A5P1Q8MH63 180 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FSIP1Q8NA03 581 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 SNIP1Q8TAD8 396 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 BCL2L2Q92843 193 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 PEX13Q92968 403 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 EXT2Q93063 718 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 ARL5BQ96KC2 179 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 MPHOSPH9Q99550 1183 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 PKP2Q99959 881 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 SRSF8Q9BRL6 282 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 HDAC8Q9BY41 377 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 CHMP5Q9NZZ3 219 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FRRS1LQ9P0K9 344 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 KLHL14Q9P2G3 628 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 TRPC4Q9UBN4 977 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 ZDHHC8Q9ULC8 765 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 NEU2Q9Y3R4 380 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 RWDD3Q9Y3V2 267 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 CFTRP13569 1480 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 GAKO14976 1311 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 CUX1P39880 1505 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 MAP3K1Q13233 1512 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 SHISA3A0PJX4 238 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 HTR3EA5X5Y0 456 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 OOEPA6NGQ2 149 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FAM90A7PA6NKC0 464 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FAM90A22PA8MWA6 464 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FAM90A12PA8MX19 464 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FAM90A23PA8MXZ1 464 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 PSMD9O00233 223 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 DYNC1I1O14576 645 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 FGF10O15520 208 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 TAF5LO75529 589 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 AMY1AP04745 511 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 PTBP1P26599 531 aaKnown RBP eCLIP5.37□□□□□ -1.555e-10■■■■□ 20.2
ECHDC1-222ENST00000531967 PSMA5P28066 241 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 CCND2P30279 289 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 HK2P52789 917 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 EPHA5P54756 1037 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 TEKQ02763 1124 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 ROM1Q03395 351 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 KCNAB1Q14722 419 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 ERCC6LQ2NKX8 1250 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 CCDC178Q5BJE1 867 aa5.37□□□□□ -1.55
ECHDC1-222ENST00000531967 KIAA0930Q6ICG6 404 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms