RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 RAP1GAP2Q684P5 730 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 TYW3Q6IPR3 259 aaKnown RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 TPGS1Q6ZTW0 290 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 METTL3Q86U44 580 aaKnown RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 TMEM199Q8N511 208 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SPATA20Q8TB22 786 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 ITFG1Q8TB96 612 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 LNX1Q8TBB1 728 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SH3GL2Q99962 352 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 RIBC2Q9H4K1 309 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 CHST7Q9NS84 486 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 CORO2BQ9UQ03 480 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 USP20Q9Y2K6 914 aa8.6□□□□□ -1.03
CTNND1-227ENST00000530748 SF3B1O75533 1304 aaKnown RBP eCLIP8.6□□□□□ -1.035e-6■■■■■ 59.8
CTNND1-227ENST00000530748 F8VP50 259 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 CYP7B1O75881 506 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 SNUPNO95149 360 aaKnown RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 LDLRP01130 860 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ZCCHC18P0CG32 403 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 NOS3P29474 1203 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 PRKCIP41743 596 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 INAQ16352 499 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 WDR59Q6PJI9 974 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ETNPPLQ8TBG4 499 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 HDAC7Q8WUI4 952 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 PROX1Q92786 737 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 SLC25A23Q9BV35 468 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 TMPRSS4Q9NRS4 437 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 OR12D3Q9UGF7 316 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 FBXO10Q9UK96 956 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 FBXL21Q9UKT6 434 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 INVSQ9Y283 1065 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 TSC22D4Q9Y3Q8 395 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ITGAVP06756 1048 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 PSMB9P28065 219 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 MAPK8P45983 427 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 CLCN5P51795 746 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 HECTD3Q5T447 861 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 FBXL19Q6PCT2 694 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 EIF1ADQ8N9N8 165 aaKnown RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ELMO1Q92556 727 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 UBE2E3Q969T4 207 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 PGM2Q96G03 612 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ADI1Q9BV57 179 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 TLR10Q9BXR5 811 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 MRPS26Q9BYN8 205 aaKnown RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 OSBPL6Q9BZF3 934 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 HDHD2Q9H0R4 259 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 SEMA4BQ9NPR2 832 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 FZD1Q9UP38 647 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 DERAQ9Y315 318 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 TPRKBQ9Y3C4 175 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 TISP43B9A030 160 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 RPL9P32969 192 aaKnown RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 S100A3P33764 101 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 CSNK2BP67870 215 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 TRIM25Q14258 630 aaKnown RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 FAM187BQ17R55 369 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 MIIPQ5JXC2 388 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 SAMD4BQ5PRF9 694 aaKnown RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 KCNK18Q7Z418 384 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 PHF13Q86YI8 300 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 SUSD6Q92537 303 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 CENPTQ96BT3 561 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 TRAPPC9Q96Q05 1148 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 SLITRK2Q9H156 845 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 RERGLQ9H628 205 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ARL15Q9NXU5 204 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 NFKBIL1Q9UBC1 381 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ATP6V1HQ9UI12 483 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ZNF510Q9Y2H8 683 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 CLUHO75153 1309 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 SGTAO43765 313 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ABHD2P08910 425 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ATP4AP20648 1035 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 IFI35P80217 286 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 XRCC4Q13426 336 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 C15orf59Q2T9L4 293 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 FGD3Q5JSP0 725 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 HYIQ5T013 277 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 DET1Q7L5Y6 550 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 GPR142Q7Z601 462 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ZNF605Q86T29 641 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 SNX32Q86XE0 403 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 OR52K1Q8NGK4 314 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 OMDQ99983 421 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 CEP44Q9C0F1 390 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 TAS2R14Q9NYV8 317 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 NDOR1Q9UHB4 597 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 PCYOX1Q9UHG3 505 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 DMGDHQ9UI17 866 aaKnown RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 PCDHGC5Q9Y5F6 944 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ANKDD1BA6NHY2 528 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 MYL12BO14950 172 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 INPP4BO15327 924 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 GNRH1P01148 92 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ANXA6P08133 673 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 GSTM5P46439 218 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms