RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTR9-205	ENST00000529898	CLTA	P09496	248 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	DLAT	P10515	647 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	VCL	P18206	1134 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	PRKACB	P22694	351 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	TBXAS1	P24557	533 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	RPL9	P32969	192 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	HAL	P42357	657 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	CBX5	P45973	191 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	POLD2	P49005	469 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	EVC	P57679	992 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	PROK1	P58294	105 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SST	P61278	116 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	MC2R	Q01718	297 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	PLOD1	Q02809	727 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	GALNT1	Q10472	559 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	HABP2	Q14520	560 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	TXNRD1	Q16881	649 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	ANKDD1A	Q495B1	522 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SLC10A5	Q5PT55	438 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	TMTC4	Q5T4D3	741 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	METTL11B	Q5VVY1	283 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SNX30	Q5VWJ9	437 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	DENND2C	Q68D51	928 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SIGIRR	Q6IA17	410 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	TAPT1	Q6NXT6	567 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SLC4A10	Q6U841	1118 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	RAPH1	Q70E73	1250 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	RASGRP2	Q7LDG7	609 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	FAM90A1	Q86YD7	464 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SH2D3C	Q8N5H7	860 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	LSMEM1	Q8N8F7	131 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	XXYLT1	Q8NBI6	393 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SLC17A8	Q8NDX2	589 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	ANGPTL6	Q8NI99	470 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	MYCBPAP	Q8TBZ2	947 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SH3KBP1	Q96B97	665 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SGK3	Q96BR1	496 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	INTS12	Q96CB8	462 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	IQCD	Q96DY2	449 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	TMA16	Q96EY4	203 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	FBXL20	Q96IG2	436 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	HIC2	Q96JB3	615 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	VPS50	Q96JG6	964 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	ARL5B	Q96KC2	179 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	CCDC138	Q96M89	665 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	TRIB1	Q96RU8	372 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	TSG101	Q99816	390 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SLF1	Q9BQI6	1058 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	FUCA2	Q9BTY2	467 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	ISCA1	Q9BUE6	129 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	IFIH1	Q9BYX4	1025 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	IMPG2	Q9BZV3	1241 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	UNK	Q9C0B0	810 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	STMN4	Q9H169	189 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SLC38A10	Q9HBR0	1119 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	NOD2	Q9HC29	1040 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	PDE11A	Q9HCR9	933 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	PCDH12	Q9NPG4	1184 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	FANCF	Q9NPI8	374 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SH3GLB2	Q9NR46	395 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	DDX56	Q9NY93	547 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	AGO2	Q9UKV8	859 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	EXOC7	Q9UPT5	735 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	TNN	Q9UQP3	1299 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	POLH	Q9Y253	713 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	RRP7A	Q9Y3A4	280 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	LRRC42	Q9Y546	428 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	SNX5	Q9Y5X3	404 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	PDS5A	Q29RF7	1337 aa	Known RBP	4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	CDHR2	Q9BYE9	1310 aa		4.16	□□□□□ -1.74
CTR9-205	ENST00000529898	PLEKHG1	Q9ULL1	1385 aa		4.15	□□□□□ -1.74
CTR9-205	ENST00000529898	SETD1A	O15047	1707 aa	Known RBP	4.15	□□□□□ -1.74
CTR9-205	ENST00000529898		A0A088AWK7	358 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	FRMD3	A2A2Y4	597 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	WDR91	A4D1P6	747 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	OR5K4	A6NMS3	321 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	RSPH10B2	B2RC85	870 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	VWC2L	B2RUY7	222 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	PRRT4	C9JH25	899 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	GOLGA8R	I6L899	631 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	AP3B1	O00203	1094 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	TRDMT1	O14717	391 aa	Known RBP	4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	KLHL41	O60662	606 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	TMCC2	O75069	709 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	SOAT2	O75908	522 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	TSPAN9	O75954	239 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	ANP32D	O95626	131 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	ATP6V1G2	O95670	118 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	MYL3	P08590	195 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	RSPH10B	P0C881	870 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	UBTFL6	P0CB48	400 aa	Predicted RBP	4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	CDK4	P11802	303 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	KRT10	P13645	584 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	PPP3CB	P16298	524 aa		4.15	□□□□□ -1.75
CTR9-205	ENST00000529898	PRLR	P16471	622 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms