RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ATMQ13315 3056 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 DOCK9Q9BZ29 2069 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 A0A1W2PQU0 124 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 CPED1A4D0V7 1026 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 H3BM21 787 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 MCF2LO15068 1137 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 SCAMP1O15126 338 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 BNIP3LO60238 219 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 PCDH8O95206 1070 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 SLC2A3P11169 496 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 PRLRP16471 622 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 HNRNPA2B1P22626 353 aaKnown RBP9.24□□□□□ -0.93
VPS11-203ENST00000529545 NUMBP49757 651 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 PLK1P53350 603 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 METAP1P53582 386 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
VPS11-203ENST00000529545 LRMPQ12912 555 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 DLG2Q15700 870 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 CNGA2Q16280 664 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 ZSCAN23Q3MJ62 389 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 ZC3H12AQ5D1E8 599 aaKnown RBP9.24□□□□□ -0.93
VPS11-203ENST00000529545 RABGAP1LQ5R372 815 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 KIAA1614Q5VZ46 1190 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 ZCCHC8Q6NZY4 707 aaKnown RBP9.24□□□□□ -0.93
VPS11-203ENST00000529545 FOXR1Q6PIV2 292 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 XKR5Q6UX68 686 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 HORMAD1Q86X24 394 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 CCAR2Q8N163 923 aaKnown RBP9.24□□□□□ -0.93
VPS11-203ENST00000529545 ATP6V0D2Q8N8Y2 350 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 CLEC4CQ8WTT0 213 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 FRS2Q8WU20 508 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 KLK6Q92876 244 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 SLC46A1Q96NT5 459 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS11-203ENST00000529545 ST7Q9NRC1 585 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 IL17BQ9UHF5 180 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 PPM1HQ9ULR3 514 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 NAALADL1Q9UQQ1 740 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 COQ4Q9Y3A0 265 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 PCDHB4Q9Y5E5 795 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 HECTD1Q9ULT8 2610 aa9.24□□□□□ -0.93
VPS11-203ENST00000529545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 A0A1B0GVL5 298 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 TCAF2A6NFQ2 919 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 A6NNZ2 444 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 K7ELQ4 463 aaPredicted RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 K7ESM1 405 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 KPNA3O00505 521 aaPredicted RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 ATP9BO43861 1147 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 FYNP06241 537 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 ZSCAN22P10073 491 aaPredicted RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 MYF5P13349 255 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 PFKFB1P16118 471 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 CMA1P23946 247 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 SYKP43405 635 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 ACADSBP45954 432 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 NFATC3Q12968 1075 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 ZNF177Q13360 481 aaPredicted RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 CBWD6Q4V339 395 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 CBWD3Q5JTY5 395 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 CBWD5Q5RIA9 395 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 RBM44Q6ZP01 1051 aaKnown RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 Q6ZVU0 165 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 BEND5Q7L4P6 421 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 PTAR1Q7Z6K3 402 aaPredicted RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 TAC4Q86UU9 113 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 OR13H1Q8NG92 308 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 WDR36Q8NI36 951 aaKnown RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 WDR48Q8TAF3 677 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 TFAP2BQ92481 460 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 ATXN7L3BQ96GX2 97 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 CCNL2Q96S94 520 aaPredicted RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 TSG101Q99816 390 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 ARHGAP9Q9BRR9 750 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 SRRTQ9BXP5 876 aaKnown RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 FZD3Q9NPG1 666 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.23□□□□□ -0.93
VPS11-203ENST00000529545 IPO11Q9UI26 975 aaKnown RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 XPO7Q9UIA9 1087 aaKnown RBP9.23□□□□□ -0.93
VPS11-203ENST00000529545 VPS28Q9UK41 221 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 RCOR1Q9UKL0 485 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 PCDHGA8Q9Y5G5 932 aa9.23□□□□□ -0.93
VPS11-203ENST00000529545 KCNU1A8MYU2 1149 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 SLC16A3O15427 465 aaKnown RBP9.22□□□□□ -0.93
VPS11-203ENST00000529545 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
VPS11-203ENST00000529545 TCEA3O75764 348 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 NEBLO76041 1014 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 TNFSF15O95150 251 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 GJB6O95452 261 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 TRUB2O95900 331 aaKnown RBP9.22□□□□□ -0.93
VPS11-203ENST00000529545 F13A1P00488 732 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 PRNPP04156 253 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 HSP90AA1P07900 732 aaKnown RBP9.22□□□□□ -0.93
VPS11-203ENST00000529545 GIMD1P0DJR0 217 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 TGM2P21980 687 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 BRD2P25440 801 aaKnown RBP9.22□□□□□ -0.93
VPS11-203ENST00000529545 CHRNA3P32297 505 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 RPIAP49247 311 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 INHBCP55103 352 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 CLDN2P57739 230 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms