RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	MOCOS	Q96EN8	888 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	LRRC61	Q9BV99	259 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	SLC4A5	Q9BY07	1137 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	DUSP16	Q9BY84	665 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	CPEB1	Q9BZB8	566 aa	Known RBP	12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	CDH19	Q9H159	772 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	CASS4	Q9NQ75	786 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	PRDM8	Q9NQV8	689 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	STIM2	Q9P246	746 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	ERRFI1	Q9UJM3	462 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	NAALADL1	Q9UQQ1	740 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	HS3ST3A1	Q9Y663	406 aa		12.08	□□□□□ -0.48
PSMD13-209	ENST00000529372	ZNF891	A8MT65	544 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	IRAK2	O43187	625 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	CELA2B	P08218	269 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	CCL4	P13236	92 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	UGT1A3	P35503	534 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	CASP4	P49662	377 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	ADK	P55263	362 aa	Known RBP	12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	INCA1	Q0VD86	236 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	ALCAM	Q13740	583 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	C16orf72	Q14CZ0	275 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	PM20D1	Q6GTS8	502 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	ARHGAP18	Q8N392	663 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	TEX19	Q8NA77	164 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	KY	Q8NBH2	561 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	FAM174A	Q8TBP5	190 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	APOBEC4	Q8WW27	367 aa	Known RBP	12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	SLC45A3	Q96JT2	553 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	LRRN3	Q9H3W5	708 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	KIAA1586	Q9HCI6	787 aa		12.07	□□□□□ -0.48
PSMD13-209	ENST00000529372	CTSL	P07711	333 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	NUMB	P49757	651 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	ATP1A2	P50993	1020 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	CDC20	Q12834	499 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	NCOA4	Q13772	614 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	EIF2S3L	Q2VIR3	472 aa	Known RBP	12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	FAM46C	Q5VWP2	391 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	TCTN3	Q6NUS6	607 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	HJURP	Q8NCD3	748 aa	Predicted RBP	12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	CPT1C	Q8TCG5	803 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	GPBAR1	Q8TDU6	330 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	OR8D1	Q8WZ84	308 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	GLMN	Q92990	594 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	TBATA	Q96M53	351 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	KLF6	Q99612	283 aa	Predicted RBP	12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	SPAST	Q9UBP0	616 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	MAP4K5	Q9Y4K4	846 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	PCDHGA3	Q9Y5H0	932 aa		12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	DIDO1	Q9BTC0	2240 aa	Known RBP	12.06	□□□□□ -0.48
PSMD13-209	ENST00000529372	MCF2L	O15068	1137 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	TGFB1I1	O43294	461 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	STX6	O43752	255 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	CNTN5	O94779	1100 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	C4BPA	P04003	597 aa	Known RBP	12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	PDGFA	P04085	211 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	PRKAR1A	P10644	381 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	TSHR	P16473	764 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	NOS2	P35228	1153 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	IRX6	P78412	446 aa	Predicted RBP	12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	PDE1C	Q14123	709 aa	Predicted RBP	12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	RILPL1	Q5EBL4	403 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	PRRT3	Q5FWE3	981 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	PIGZ	Q86VD9	579 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	CARNMT1	Q8N4J0	409 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	ARL10	Q8N8L6	244 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	EDEM1	Q92611	657 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	HEXIM2	Q96MH2	286 aa	Known RBP	12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	CMKLR1	Q99788	373 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	APOBEC3B	Q9UH17	382 aa	Known RBP	12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	RNF215	Q9Y6U7	377 aa		12.05	□□□□□ -0.48
PSMD13-209	ENST00000529372	EFCAB7	A8K855	629 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	ALOX15B	O15296	676 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	ACSL4	O60488	711 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	LUC7L3	O95232	432 aa	Known RBP	12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	KIF20A	O95235	890 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	RABIF	P47224	123 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	VASP	P50552	380 aa	Predicted RBP	12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	PFN3	P60673	137 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	CLDN10	P78369	228 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	MRPL49	Q13405	166 aa	Known RBP	12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	CDH18	Q13634	790 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	DEFB109B	Q30KR1	87 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	ATP1A1-AS1	Q5TC04	95 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	SPOPL	Q6IQ16	392 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	ESRP1	Q6NXG1	681 aa	Known RBP	12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	TIPARP	Q7Z3E1	657 aa	Known RBP	12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	PHACTR4	Q8IZ21	702 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	SLC34A3	Q8N130	599 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	CFAP52	Q8N1V2	620 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	IL22RA1	Q8N6P7	574 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	EFCAB3	Q8N7B9	438 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	PDCD6IP	Q8WUM4	868 aa	Known RBP	12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	MARVELD3	Q96A59	401 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	LLPH	Q9BRT6	129 aa	Known RBP	12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	ULBP1	Q9BZM6	244 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	UBXN6	Q9BZV1	441 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	SEMA6C	Q9H3T2	930 aa		12.04	□□□□□ -0.48
PSMD13-209	ENST00000529372	AGPAT3	Q9NRZ7	376 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms