RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CLEC14AQ86T13 490 aa19.47■□□□□ 0.71
SSRP1-204ENST00000529002 ERCC4Q92889 916 aaPredicted RBP19.47■□□□□ 0.71
SSRP1-204ENST00000529002 KAT5Q92993 513 aa19.47■□□□□ 0.71
SSRP1-204ENST00000529002 DUSP23Q9BVJ7 150 aa19.47■□□□□ 0.71
SSRP1-204ENST00000529002 USP29Q9HBJ7 922 aa19.47■□□□□ 0.71
SSRP1-204ENST00000529002 STARD5Q9NSY2 213 aa19.47■□□□□ 0.71
SSRP1-204ENST00000529002 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.47■□□□□ 0.71
SSRP1-204ENST00000529002 SLC25A13Q9UJS0 675 aa19.47■□□□□ 0.71
SSRP1-204ENST00000529002 ZFC3H1O60293 1989 aaKnown RBP19.46■□□□□ 0.71
SSRP1-204ENST00000529002 MUSKO15146 869 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 RHOBTB3O94955 611 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 FAM87AP0C7U9 286 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 PFKFB1P16118 471 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 GGCXP38435 758 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 HNRNPKP61978 463 aaKnown RBP eCLIP19.46■□□□□ 0.71
SSRP1-204ENST00000529002 SLC12A1Q13621 1099 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 CNGA2Q16280 664 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 ERICH6BQ5W0A0 696 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 ZCCHC8Q6NZY4 707 aaKnown RBP19.46■□□□□ 0.71
SSRP1-204ENST00000529002 SMYD4Q8IYR2 804 aaPredicted RBP19.46■□□□□ 0.71
SSRP1-204ENST00000529002 SH2D3CQ8N5H7 860 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 CHST14Q8NCH0 376 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 WDR36Q8NI36 951 aaKnown RBP19.46■□□□□ 0.71
SSRP1-204ENST00000529002 FEM1AQ9BSK4 669 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 SYNDIG1Q9H7V2 258 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 ST7Q9NRC1 585 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 COQ4Q9Y3A0 265 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 PCDHB4Q9Y5E5 795 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 NBASA2RRP1 2371 aa19.46■□□□□ 0.71
SSRP1-204ENST00000529002 EME2A4GXA9 379 aaPredicted RBP19.45■□□□□ 0.7
SSRP1-204ENST00000529002 K7ERQ8 282 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 ALOX15BO15296 676 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 FBXO21O94952 628 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 TRUB2O95900 331 aaKnown RBP19.45■□□□□ 0.7
SSRP1-204ENST00000529002 YWHAEP62258 255 aaKnown RBP19.45■□□□□ 0.7
SSRP1-204ENST00000529002 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
SSRP1-204ENST00000529002 ATG14Q6ZNE5 492 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 USP53Q70EK8 1073 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 GUF1Q8N442 669 aaKnown RBP19.45■□□□□ 0.7
SSRP1-204ENST00000529002 ARL14Q8N4G2 192 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 LMX1AQ8TE12 382 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 BTN2A3PQ96KV6 586 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 HSFY1Q96LI6 401 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 TCEAL2Q9H3H9 227 aaPredicted RBP19.45■□□□□ 0.7
SSRP1-204ENST00000529002 GPR27Q9NS67 375 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 EVA1BQ9NVM1 165 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 KIAA1257Q9ULG3 409 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 ATXN7L1Q9ULK2 861 aaPredicted RBP19.45■□□□□ 0.7
SSRP1-204ENST00000529002 OR51B4Q9Y5P0 310 aa19.45■□□□□ 0.7
SSRP1-204ENST00000529002 SYNJ2BP-COX16A0A087WUM0 186 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 TCAF2A6NFQ2 919 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 A6NNZ2 444 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 AGRPO00253 132 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 SPINT1O43278 529 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 SUV39H1O43463 412 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 NOBOXO60393 691 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 SNAP91O60641 907 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 CSF2P04141 144 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 EPB41P11171 864 aaKnown RBP19.44■□□□□ 0.7
SSRP1-204ENST00000529002 SRCP12931 536 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 NME1P15531 152 aaKnown RBP19.44■□□□□ 0.7
SSRP1-204ENST00000529002 SLC5A2P31639 672 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 CHRNA3P32297 505 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 TMEM259Q4ZIN3 620 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 FBXL22Q6P050 247 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 B3GNT8Q7Z7M8 397 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 RBFAQ8N0V3 343 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 IFT43Q96FT9 208 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 ARHGAP9Q9BRR9 750 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 COX16Q9P0S2 106 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 VPS28Q9UK41 221 aa19.44■□□□□ 0.7
SSRP1-204ENST00000529002 KCNU1A8MYU2 1149 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 AQP9O43315 295 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 SMAD6O43541 496 aaKnown RBP19.43■□□□□ 0.7
SSRP1-204ENST00000529002 STX10O60499 249 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 PAK4O96013 591 aaPredicted RBP19.43■□□□□ 0.7
SSRP1-204ENST00000529002 IGLV3-25P01717 112 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 PAEPP09466 180 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 HGFP14210 728 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 VASPP50552 380 aaPredicted RBP19.43■□□□□ 0.7
SSRP1-204ENST00000529002 DPYDQ12882 1025 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 C1orf61Q13536 156 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 NR0B2Q15466 257 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 NEK5Q6P3R8 708 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 OR2A12Q8NGT7 310 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 GRIN3AQ8TCU5 1115 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 RPRD1AQ96P16 312 aaPredicted RBP19.43■□□□□ 0.7
SSRP1-204ENST00000529002 ANKMY1Q9P2S6 941 aa19.43■□□□□ 0.7
SSRP1-204ENST00000529002 CCDC187A0A096LP49 1063 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 SPTY2D1-AS1A0A0U1RR47 76 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 GCATO75600 419 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 JUNDP17535 347 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 RRM1P23921 792 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 DNM1Q05193 864 aaKnown RBP19.42■□□□□ 0.7
SSRP1-204ENST00000529002 EIF2B5Q13144 721 aaKnown RBP19.42■□□□□ 0.7
SSRP1-204ENST00000529002 TAF5Q15542 800 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 ARSIQ5FYB1 569 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 C14orf80Q86SX3 495 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 PARGQ86W56 976 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 JAMLQ86YT9 394 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms